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S. scrofa Gene: KLHL29 - ENSSSCG00000008593 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008593
NameKLHL29
Descriptionkelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
OrganismSus scrofa (pig)
Synonym(s)kbtbd9, kiaa1921
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
5.35e3
  • 5.35e3
77.33
  • 77.33
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
6.00e3
  • 6.00e3
  • 8.79e3
  • 9.51e3
  • 1.06e4
  • 1.20e4
74.58
  • 74.58
  • 62.74
  • 59.68
  • 54.96
  • 49.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.06e3
  • 7.06e3
70.06
  • 70.06
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
7.94e3
  • 7.94e3
  • 7.99e3
  • 9.07e3
  • 1.07e4
66.35
  • 66.35
  • 66.11
  • 61.56
  • 54.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.36e3
  • 8.36e3
64.55
  • 64.55
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
9.62e3
  • 9.62e3
59.24
  • 59.24
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
54.89
  • 54.89
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.03
  • 54.03
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.90
  • 53.90
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.09e4
  • 1.09e4
  • 1.34e4
53.69
  • 53.69
  • 43.30
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
51.58
  • 51.58
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
49.98
  • 49.98
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.18e4
  • 1.18e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.18e4
  • 1.18e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
  • 1.43e4
47.52
  • 47.52
  • 39.50
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.35e4
47.51
  • 47.51
  • 42.65
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
  • 1.56e4
45.71
  • 45.71
  • 33.84
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.31e4
  • 1.31e4
44.45
  • 44.45
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
44.02
  • 44.02
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
42.85
  • 42.85
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.48e4
41.82
  • 41.82
  • 37.16
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
  • 1.45e4
41.01
  • 41.01
  • 38.53
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.92
  • 39.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.75
  • 39.75
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.42
  • 39.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.48e4
  • 1.48e4
37.34
  • 37.34
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
36.12
  • 36.12
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
36.10
  • 36.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
  • 1.62e4
  • 1.65e4
35.92
  • 35.92
  • 31.28
  • 29.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.54e4
  • 1.54e4
34.76
  • 34.76
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
  • 1.67e4
31.61
  • 31.61
  • 29.18
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000008593.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000008593.

Cross-references

EnsemblENSSSCG00000008593 (KLHL29)
HGNCHGNC:29404 (KLHL29)
EMBLAEMK01179452, CU463075, CU467526
Uniprot/SPTREMBLF1SCW1, F1SCW1_PIG

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