We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: - ENSSSCG00000008754 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008754
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
801
  • 801
  • 1.87e3
  • 5.29e3
96.61
  • 96.61
  • 92.09
  • 77.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
840
  • 840
  • 1.47e3
96.44
  • 96.44
  • 93.76
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
971
  • 971
95.89
  • 95.89
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.39e3
  • 1.39e3
94.12
  • 94.12
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
2.52e3
  • 2.52e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
2.63e3
  • 2.63e3
88.86
  • 88.86
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
  • 1.24e4
48.00
  • 48.00
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.78e4
32.18
  • 32.18
  • 24.44
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.65e4
  • 1.65e4
30.02
  • 30.02
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.79e4
  • 1.79e4
  • 1.83e4
  • 2.16e4
24.15
  • 24.15
  • 22.46
  • 8.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.85e4
  • 1.85e4
  • 1.96e4
  • 2.06e4
21.69
  • 21.69
  • 16.71
  • 12.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.96e4
  • 1.96e4
16.89
  • 16.89
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.00e4
  • 2.00e4
  • 2.18e4
15.24
  • 15.24
  • 7.71
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.07e4
  • 2.07e4
12.24
  • 12.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000008754.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000008754.

Cross-references

EnsemblENSSSCG00000008754
EMBLCU693414
Uniprot/SPTREMBLF1S5B1, F1S5B1_PIG

Do not show this banner again