S. scrofa Gene: - ENSSSCG00000008928 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000008928
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)32 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000989penis
  • UBERON:0034919juvenile stage
8.11e3
  • 8.11e3
65.63
  • 65.63
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
  • 1.87e4
31.77
  • 31.77
  • 20.60
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.07
  • 29.07
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
27.34
  • 27.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.83e4
  • 1.83e4
  • 2.06e4
  • 2.06e4
22.44
  • 22.44
  • 12.74
  • 12.74
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.90e4
  • 1.90e4
19.49
  • 19.49
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.91e4
  • 1.91e4
19.22
  • 19.22
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.92e4
  • 1.92e4
18.63
  • 18.63
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.93e4
  • 1.93e4
18.10
  • 18.10
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.04e4
  • 2.04e4
13.73
  • 13.73
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.07e4
  • 2.07e4
12.43
  • 12.43
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.07e4
  • 2.07e4
12.29
  • 12.29
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
2.09e4
  • 2.09e4
11.49
  • 11.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species2 genesCompare expression
Laurasiatheria3 species5 genesCompare expression
Boreoeutheria11 species18 genesCompare expression
Theria12 species19 genesCompare expression
Mammalia13 species21 genesCompare expression
Amniota15 species23 genesCompare expression
Tetrapoda16 species24 genesCompare expression
Euteleostomi17 species25 genesCompare expression
Bilateria24 species32 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000008928.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Cetartiodactyla2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000008928.

Cross-references

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