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S. scrofa Gene: PHF11 - ENSSSCG00000009396 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009396
NamePHF11
DescriptionPHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
OrganismSus scrofa (pig)
Synonym(s)bcap, iger, ny-ren-34
Orthologs(s)21 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.02e3
  • 1.02e3
  • 1.06e3
  • 2.31e3
95.66
  • 95.66
  • 95.51
  • 90.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.16e3
  • 1.16e3
  • 1.30e3
  • 1.61e3
95.09
  • 95.09
  • 94.51
  • 93.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.43e3
  • 1.43e3
93.92
  • 93.92
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.65e3
  • 1.65e3
93.00
  • 93.00
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
2.10e3
  • 2.10e3
  • 2.27e3
91.11
  • 91.11
  • 90.40
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
2.11e3
  • 2.11e3
  • 3.41e3
  • 1.24e4
91.06
  • 91.06
  • 85.53
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.17e3
  • 2.17e3
90.81
  • 90.81
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
2.26e3
  • 2.26e3
90.43
  • 90.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
  • 4.14e3
  • 4.36e3
90.08
  • 90.08
  • 82.47
  • 81.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
2.36e3
  • 2.36e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
2.48e3
  • 2.48e3
  • 3.53e3
  • 3.84e3
89.48
  • 89.48
  • 85.05
  • 83.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
2.50e3
  • 2.50e3
89.40
  • 89.40
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.81e3
  • 2.81e3
88.08
  • 88.08
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.19e3
  • 3.19e3
86.49
  • 86.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.41e3
  • 3.41e3
  • 3.44e3
  • 4.64e3
85.55
  • 85.55
  • 85.43
  • 80.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.64e3
  • 3.64e3
84.58
  • 84.58
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
3.77e3
  • 3.77e3
84.02
  • 84.02
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.96e3
  • 3.96e3
  • 5.34e3
83.22
  • 83.22
  • 77.38
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
4.00e3
  • 4.00e3
83.04
  • 83.04
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
4.03e3
  • 4.03e3
82.94
  • 82.94
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.34e3
  • 4.34e3
  • 4.45e3
  • 5.33e3
  • 7.64e3
  • 7.99e3
81.61
  • 81.61
  • 81.14
  • 77.43
  • 67.60
  • 66.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
4.49e3
  • 4.49e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
4.71e3
  • 4.71e3
  • 5.91e3
80.03
  • 80.03
  • 74.95
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
5.12e3
  • 5.12e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
5.24e3
  • 5.24e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
5.32e3
  • 5.32e3
77.47
  • 77.47
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
5.59e3
  • 5.59e3
76.32
  • 76.32
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
5.71e3
  • 5.71e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.09e3
  • 6.09e3
74.20
  • 74.20
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.93e3
  • 6.93e3
70.63
  • 70.63
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
7.17e3
  • 7.17e3
69.63
  • 69.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
7.34e3
  • 7.34e3
68.88
  • 68.88
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
7.57e3
  • 7.57e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.68e3
  • 7.68e3
  • 8.61e3
  • 9.04e3
  • 9.89e3
67.44
  • 67.44
  • 63.51
  • 61.67
  • 58.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
7.83e3
  • 7.83e3
66.80
  • 66.80
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.89e3
  • 7.89e3
66.57
  • 66.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.20e3
  • 8.20e3
  • 8.33e3
65.24
  • 65.24
  • 64.70
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.61e3
  • 8.61e3
  • 1.05e4
63.52
  • 63.52
  • 55.56
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.01e3
  • 9.01e3
  • 1.09e4
61.81
  • 61.81
  • 53.87
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
9.08e3
  • 9.08e3
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
9.08e3
  • 9.08e3
61.52
  • 61.52
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
9.23e3
  • 9.23e3
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.29e3
  • 9.29e3
60.61
  • 60.61
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
9.34e3
  • 9.34e3
60.42
  • 60.42
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
9.48e3
  • 9.48e3
59.84
  • 59.84
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.79
  • 56.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species2 genesCompare expression
Laurasiatheria4 species5 genesCompare expression
Boreoeutheria12 species18 genesCompare expression
Theria13 species19 genesCompare expression
Amniota15 species21 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009396.

Cross-references

EnsemblENSSSCG00000009396 (PHF11)
HGNCHGNC:17024 (PHF11)
EMBLCU633573
Uniprot/SPTREMBLF1RK19, F1RK19_PIG

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