We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: CCDC122 - ENSSSCG00000009426 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009426
NameCCDC122
Descriptioncoiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
OrganismSus scrofa (pig)
Synonym(s)flj31846
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.02e3
  • 3.02e3
  • 8.84e3
87.20
  • 87.20
  • 62.52
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
4.91e3
  • 4.91e3
  • 1.24e4
79.20
  • 79.20
  • 47.54
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
6.71e3
  • 6.71e3
  • 9.52e3
71.57
  • 71.57
  • 59.63
AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
7.76e3
  • 7.76e3
67.11
  • 67.11
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.88e3
  • 7.88e3
  • 1.15e4
  • 1.42e4
66.60
  • 66.60
  • 51.08
  • 39.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.68e3
  • 8.68e3
  • 1.22e4
  • 1.24e4
63.23
  • 63.23
  • 48.19
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
  • 1.01e4
  • 1.11e4
61.54
  • 61.54
  • 57.34
  • 52.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.85e3
  • 9.85e3
  • 1.07e4
  • 1.42e4
58.24
  • 58.24
  • 54.74
  • 39.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.90
  • 56.90
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.03e4
  • 1.03e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
  • 1.13e4
  • 1.16e4
  • 1.22e4
  • 1.43e4
56.42
  • 56.42
  • 51.97
  • 50.90
  • 48.18
  • 39.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
56.19
  • 56.19
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
55.99
  • 55.99
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.04e4
  • 1.04e4
55.93
  • 55.93
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.06e4
  • 1.06e4
55.22
  • 55.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
  • 1.27e4
  • 1.33e4
54.08
  • 54.08
  • 46.05
  • 43.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.93
  • 53.93
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.87
  • 53.87
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.82
  • 53.82
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.64
  • 53.64
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
  • 1.13e4
  • 1.29e4
53.33
  • 53.33
  • 51.94
  • 45.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
53.03
  • 53.03
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.20e4
52.73
  • 52.73
  • 49.27
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
52.67
  • 52.67
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.13e4
  • 1.13e4
52.22
  • 52.22
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
51.67
  • 51.67
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.05
  • 51.05
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.30e4
  • 1.40e4
  • 1.44e4
50.83
  • 50.83
  • 45.02
  • 40.80
  • 39.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
50.31
  • 50.31
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
49.53
  • 49.53
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
49.44
  • 49.44
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.20e4
  • 1.20e4
  • 1.28e4
49.10
  • 49.10
  • 45.56
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.21e4
  • 1.21e4
48.60
  • 48.60
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.50
  • 48.50
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.43
  • 48.43
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
47.98
  • 47.98
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.46
  • 47.46
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
47.01
  • 47.01
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
43.60
  • 43.60
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
43.41
  • 43.41
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
40.22
  • 40.22
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.54e4
  • 1.54e4
34.91
  • 34.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009426.

Cross-references

EnsemblENSSSCG00000009426 (CCDC122)
HGNCHGNC:26478 (CCDC122)
EMBLCU075918
Uniprot/SPTREMBLF1RJX6, F1RJX6_PIG, F1RJX7, F1RJX7_PIG

Do not show this banner again