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S. scrofa Gene: CLDN10 - ENSSSCG00000009500 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009500
NameCLDN10
Descriptionclaudin 10 [Source:HGNC Symbol;Acc:HGNC:2033]
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
619
  • 619
  • 1.54e3
97.38
  • 97.38
  • 93.49
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
751
  • 751
96.82
  • 96.82
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
886
  • 886
  • 6.72e3
  • 1.08e4
96.25
  • 96.25
  • 71.50
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.94e3
  • 1.94e3
  • 3.35e3
  • 3.48e3
  • 4.78e3
91.78
  • 91.78
  • 85.81
  • 85.23
  • 79.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.17e3
  • 2.17e3
  • 4.00e3
90.81
  • 90.81
  • 83.04
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
2.23e3
  • 2.23e3
90.55
  • 90.55
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.33e3
  • 2.33e3
90.14
  • 90.14
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.49e3
  • 2.49e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.91e3
  • 2.91e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
3.02e3
  • 3.02e3
87.21
  • 87.21
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.39e3
  • 3.39e3
85.65
  • 85.65
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
3.49e3
  • 3.49e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.63e3
  • 3.63e3
  • 3.64e3
  • 1.28e4
84.63
  • 84.63
  • 84.59
  • 45.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
3.74e3
  • 3.74e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.75e3
  • 3.75e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.11e3
  • 4.11e3
  • 6.72e3
82.60
  • 82.60
  • 71.52
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
4.13e3
  • 4.13e3
82.51
  • 82.51
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
4.27e3
  • 4.27e3
81.91
  • 81.91
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
7.45e3
  • 7.45e3
68.44
  • 68.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
7.60e3
  • 7.60e3
  • 8.82e3
  • 9.79e3
67.77
  • 67.77
  • 62.62
  • 58.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
8.22e3
  • 8.22e3
  • 9.66e3
  • 1.40e4
65.18
  • 65.18
  • 59.07
  • 40.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
9.12e3
  • 9.12e3
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
9.15e3
  • 9.15e3
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
9.35e3
  • 9.35e3
60.36
  • 60.36
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
9.41e3
  • 9.41e3
60.11
  • 60.11
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
9.51e3
  • 9.51e3
59.68
  • 59.68
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.94
  • 56.94
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
56.44
  • 56.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.32e4
  • 1.61e4
56.08
  • 56.08
  • 43.95
  • 31.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
  • 1.32e4
  • 1.44e4
  • 1.44e4
  • 1.76e4
55.76
  • 55.76
  • 44.03
  • 39.12
  • 39.07
  • 25.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.13e4
  • 1.13e4
  • 1.24e4
52.31
  • 52.31
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.14e4
  • 1.14e4
51.57
  • 51.57
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.43
  • 51.43
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
50.55
  • 50.55
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.79
  • 45.79
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.42
  • 45.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.31e4
  • 1.31e4
  • 1.43e4
44.31
  • 44.31
  • 39.41
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
44.24
  • 44.24
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
43.92
  • 43.92
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.37e4
  • 1.37e4
41.99
  • 41.99
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.68
  • 41.68
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.43e4
41.65
  • 41.65
  • 39.31
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.43e4
  • 1.43e4
39.49
  • 39.49
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
38.61
  • 38.61
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
36.51
  • 36.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
33.63
  • 33.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009500.

Cross-references

EnsemblENSSSCG00000009500 (CLDN10)
EMBLCT971578
Uniprot/SPTREMBLF1RP52, F1RP52_PIG

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