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S. scrofa Gene: REEP4 - ENSSSCG00000009617 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009617
NameREEP4
Descriptionreceptor accessory protein 4 [Source:HGNC Symbol;Acc:HGNC:26176]
OrganismSus scrofa (pig)
Synonym(s)c8orf20, flj22246, flj22277, pp432, yip2c
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.68e3
  • 1.68e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
4.16e3
  • 4.16e3
82.39
  • 82.39
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
4.22e3
  • 4.22e3
82.11
  • 82.11
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.68e3
  • 4.68e3
80.18
  • 80.18
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.70e3
  • 4.70e3
80.09
  • 80.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
  • 8.92e3
  • 9.08e3
76.94
  • 76.94
  • 62.18
  • 61.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
5.70e3
  • 5.70e3
75.85
  • 75.85
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
5.80e3
  • 5.80e3
  • 8.43e3
75.41
  • 75.41
  • 64.29
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
7.13e3
  • 7.13e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
7.65e3
  • 7.65e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.07e3
  • 8.07e3
  • 9.46e3
  • 1.29e4
65.81
  • 65.81
  • 59.90
  • 45.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
8.47e3
  • 8.47e3
64.11
  • 64.11
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
8.51e3
  • 8.51e3
  • 1.11e4
63.92
  • 63.92
  • 53.09
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
8.57e3
  • 8.57e3
  • 9.62e3
63.66
  • 63.66
  • 59.24
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.82e3
  • 8.82e3
62.60
  • 62.60
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
9.09e3
  • 9.09e3
61.46
  • 61.46
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
9.54e3
  • 9.54e3
  • 9.72e3
  • 1.28e4
59.55
  • 59.55
  • 58.78
  • 45.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.61e3
  • 9.61e3
  • 1.24e4
59.29
  • 59.29
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
9.78e3
  • 9.78e3
  • 1.16e4
  • 1.18e4
  • 1.19e4
  • 1.36e4
58.56
  • 58.56
  • 50.70
  • 50.03
  • 49.37
  • 42.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.81e3
  • 9.81e3
  • 1.26e4
  • 1.28e4
58.41
  • 58.41
  • 46.51
  • 45.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
  • 1.09e4
57.24
  • 57.24
  • 53.99
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.07e4
  • 1.07e4
54.50
  • 54.50
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
54.39
  • 54.39
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
50.27
  • 50.27
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.18e4
  • 1.18e4
49.97
  • 49.97
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.19e4
  • 1.19e4
49.69
  • 49.69
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
49.22
  • 49.22
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.55
  • 48.55
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
47.73
  • 47.73
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
44.47
  • 44.47
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
43.62
  • 43.62
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
43.24
  • 43.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.38e4
  • 1.45e4
  • 1.48e4
42.87
  • 42.87
  • 41.30
  • 38.41
  • 37.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.50
  • 42.50
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.39e4
  • 1.39e4
41.23
  • 41.23
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
40.47
  • 40.47
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.86
  • 39.86
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.51e4
  • 1.51e4
35.80
  • 35.80
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.58e4
  • 1.58e4
33.11
  • 33.11
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.63e4
  • 1.63e4
30.96
  • 30.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009617.

Cross-references

EnsemblENSSSCG00000009617 (REEP4)
HGNCHGNC:26176 (REEP4)
EMBLCT827951
Uniprot/SPTREMBLF1RMB6, F1RMB6_PIG

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