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S. scrofa Gene: GLRA3 - ENSSSCG00000009698 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009698
NameGLRA3
Descriptionglycine receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4328]
OrganismSus scrofa (pig)
Orthologs(s)18 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
2.18e3
  • 2.18e3
90.78
  • 90.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.16e3
  • 6.16e3
  • 7.30e3
73.88
  • 73.88
  • 69.08
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
8.12e3
  • 8.12e3
65.58
  • 65.58
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
8.42e3
  • 8.42e3
64.32
  • 64.32
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.00e4
  • 1.00e4
57.61
  • 57.61
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.81
  • 53.81
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.82e4
48.38
  • 48.38
  • 22.97
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
47.08
  • 47.08
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.89
  • 44.89
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.51
  • 42.51
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.39e4
  • 1.40e4
  • 1.92e4
41.48
  • 41.48
  • 41.07
  • 40.78
  • 18.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.79e4
  • 1.87e4
34.24
  • 34.24
  • 24.17
  • 20.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
34.18
  • 34.18
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
  • 1.71e4
32.53
  • 32.53
  • 27.65
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
26.91
  • 26.91
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
19.56
  • 19.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.90e4
  • 1.90e4
  • 2.06e4
19.33
  • 19.33
  • 12.74
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
17.59
  • 17.59
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
1.96e4
  • 1.96e4
17.03
  • 17.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.99e4
  • 1.99e4
15.83
  • 15.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009698.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000009698.

Cross-references

EnsemblENSSSCG00000009698 (GLRA3)
HGNCHGNC:4328 (GLRA3)
EMBLCT737274, CT841549
Uniprot/SPTREMBLF1RJ16, F1RJ16_PIG

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