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S. scrofa Gene: ZNF84 - ENSSSCG00000009729 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009729
NameZNF84
Descriptionzinc finger protein 84 [Source:HGNC Symbol;Acc:HGNC:13159]
OrganismSus scrofa (pig)
Synonym(s)hpf2
Orthologs(s)47 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.69e3
  • 5.69e3
  • 8.60e3
75.89
  • 75.89
  • 63.56
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
6.14e3
  • 6.14e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
6.28e3
  • 6.28e3
  • 1.13e4
  • 1.27e4
73.39
  • 73.39
  • 52.20
  • 46.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
6.38e3
  • 6.38e3
72.96
  • 72.96
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
6.67e3
  • 6.67e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
6.77e3
  • 6.77e3
71.30
  • 71.30
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
6.91e3
  • 6.91e3
70.69
  • 70.69
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
7.05e3
  • 7.05e3
70.10
  • 70.10
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
7.10e3
  • 7.10e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
7.24e3
  • 7.24e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
  • 1.14e4
69.25
  • 69.25
  • 51.72
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.36e3
  • 7.36e3
68.82
  • 68.82
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.75e3
  • 7.75e3
  • 8.66e3
  • 9.03e3
  • 1.02e4
  • 1.25e4
67.16
  • 67.16
  • 63.31
  • 61.71
  • 56.84
  • 46.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
7.98e3
  • 7.98e3
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
8.03e3
  • 8.03e3
65.94
  • 65.94
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.04e3
  • 8.04e3
65.91
  • 65.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
8.23e3
  • 8.23e3
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
8.32e3
  • 8.32e3
64.74
  • 64.74
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
8.50e3
  • 8.50e3
63.95
  • 63.95
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
8.58e3
  • 8.58e3
  • 8.96e3
  • 1.20e4
63.65
  • 63.65
  • 62.04
  • 49.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
9.21e3
  • 9.21e3
60.96
  • 60.96
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
9.78e3
  • 9.78e3
58.54
  • 58.54
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
9.91e3
  • 9.91e3
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.00e4
  • 1.00e4
  • 1.21e4
57.48
  • 57.48
  • 48.73
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.01e4
  • 1.01e4
  • 1.07e4
  • 1.08e4
  • 1.10e4
57.39
  • 57.39
  • 54.51
  • 54.36
  • 53.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.01e4
  • 1.01e4
  • 1.13e4
  • 1.26e4
57.28
  • 57.28
  • 52.26
  • 46.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
56.85
  • 56.85
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
56.72
  • 56.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.11e4
55.50
  • 55.50
  • 52.91
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.13e4
55.43
  • 55.43
  • 52.15
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.30
  • 55.30
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.60
  • 54.60
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
  • 1.24e4
  • 1.32e4
54.38
  • 54.38
  • 47.51
  • 43.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.05
  • 54.05
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.95
  • 53.95
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.12e4
  • 1.12e4
52.50
  • 52.50
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.15e4
  • 1.34e4
52.45
  • 52.45
  • 51.14
  • 43.21
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
52.42
  • 52.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.21e4
  • 1.36e4
52.00
  • 52.00
  • 48.90
  • 42.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.15e4
  • 1.15e4
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.70
  • 50.70
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.68
  • 50.68
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
50.60
  • 50.60
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.17e4
  • 1.17e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
47.73
  • 47.73
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
44.01
  • 44.01
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
  • 1.40e4
42.50
  • 42.50
  • 40.58
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Tetrapoda10 species47 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009729.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda5 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000009729.

Cross-references

EnsemblENSSSCG00000009729 (ZNF84)
HGNCHGNC:13159 (ZNF84)
EMBLCU468405
Uniprot/SPTREMBLF1RI76, F1RI76_PIG

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