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S. scrofa Gene: PITPNB - ENSSSCG00000009967 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000009967
NamePITPNB
Descriptionphosphatidylinositol transfer protein beta [Source:HGNC Symbol;Acc:HGNC:9002]
OrganismSus scrofa (pig)
Synonym(s)vib1b
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
421
  • 421
98.22
  • 98.22
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.49e3
  • 1.49e3
93.67
  • 93.67
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.85e3
  • 1.85e3
92.17
  • 92.17
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.93e3
  • 1.93e3
91.82
  • 91.82
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.00e3
  • 2.00e3
  • 2.08e3
  • 2.69e3
  • 2.74e3
91.54
  • 91.54
  • 91.18
  • 88.62
  • 88.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.01e3
  • 2.01e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
2.03e3
  • 2.03e3
  • 2.70e3
  • 2.78e3
91.40
  • 91.40
  • 88.54
  • 88.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.13e3
  • 2.13e3
  • 2.49e3
  • 4.99e3
90.97
  • 90.97
  • 89.43
  • 78.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
2.21e3
  • 2.21e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.27e3
  • 2.27e3
  • 2.49e3
90.37
  • 90.37
  • 89.46
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
2.28e3
  • 2.28e3
  • 2.52e3
  • 4.37e3
90.32
  • 90.32
  • 89.32
  • 81.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.32e3
  • 2.32e3
90.17
  • 90.17
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
2.38e3
  • 2.38e3
  • 4.95e3
  • 1.24e4
89.92
  • 89.92
  • 79.03
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.43e3
  • 2.43e3
89.72
  • 89.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.56e3
  • 2.56e3
  • 3.58e3
89.16
  • 89.16
  • 84.82
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
2.60e3
  • 2.60e3
88.98
  • 88.98
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.64e3
  • 2.64e3
88.81
  • 88.81
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
2.67e3
  • 2.67e3
88.69
  • 88.69
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.74e3
  • 2.74e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.81e3
  • 2.81e3
88.09
  • 88.09
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.87e3
  • 2.87e3
87.82
  • 87.82
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.88e3
  • 2.88e3
87.78
  • 87.78
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
3.01e3
  • 3.01e3
87.24
  • 87.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
3.08e3
  • 3.08e3
  • 5.41e3
86.96
  • 86.96
  • 77.06
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
3.08e3
  • 3.08e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
3.08e3
  • 3.08e3
86.93
  • 86.93
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
3.09e3
  • 3.09e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.19e3
  • 3.19e3
  • 4.16e3
  • 5.17e3
86.50
  • 86.50
  • 82.38
  • 78.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.19e3
  • 3.19e3
  • 8.11e3
86.50
  • 86.50
  • 65.64
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.21e3
  • 3.21e3
86.39
  • 86.39
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
3.24e3
  • 3.24e3
86.28
  • 86.28
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.37e3
  • 3.37e3
  • 5.02e3
85.71
  • 85.71
  • 78.71
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
3.45e3
  • 3.45e3
  • 3.62e3
85.40
  • 85.40
  • 84.64
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
3.47e3
  • 3.47e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
3.48e3
  • 3.48e3
85.27
  • 85.27
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
3.49e3
  • 3.49e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.58e3
  • 3.58e3
84.82
  • 84.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.77e3
  • 3.77e3
  • 4.29e3
  • 5.05e3
84.04
  • 84.04
  • 81.82
  • 78.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
3.80e3
  • 3.80e3
83.91
  • 83.91
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
3.98e3
  • 3.98e3
83.15
  • 83.15
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
3.99e3
  • 3.99e3
83.08
  • 83.08
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.32e3
  • 4.32e3
  • 4.73e3
  • 4.90e3
  • 5.50e3
  • 6.34e3
81.69
  • 81.69
  • 79.94
  • 79.22
  • 76.69
  • 73.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
4.45e3
  • 4.45e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
4.46e3
  • 4.46e3
81.09
  • 81.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
4.55e3
  • 4.55e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
4.99e3
  • 4.99e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.11e3
  • 6.11e3
74.12
  • 74.12
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
6.30e3
  • 6.30e3
73.30
  • 73.30
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.72e3
  • 6.72e3
71.54
  • 71.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000009967.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000009967.

Cross-references

EnsemblENSSSCG00000009967 (PITPNB)
HGNCHGNC:9002 (PITPNB)
EMBLCT990610
Uniprot/SPTREMBLF1RG66, F1RG66_PIG, I3LGJ4, I3LGJ4_PIG

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