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S. scrofa Gene: GHITM - ENSSSCG00000010345 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000010345
NameGHITM
Descriptiongrowth hormone inducible transmembrane protein [Source:HGNC Symbol;Acc:HGNC:17281]
OrganismSus scrofa (pig)
Synonym(s)derp2, hspc282, my021, ptd010, tmbim5
Orthologs(s)30 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
512
  • 512
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
551
  • 551
  • 790
  • 989
97.67
  • 97.67
  • 96.66
  • 95.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
617
  • 617
  • 1.35e3
97.39
  • 97.39
  • 94.29
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
621
  • 621
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
648
  • 648
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
667
  • 667
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
707
  • 707
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
712
  • 712
96.99
  • 96.99
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
733
  • 733
  • 1.15e3
96.90
  • 96.90
  • 95.13
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
746
  • 746
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
794
  • 794
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
812
  • 812
  • 869
96.56
  • 96.56
  • 96.32
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
823
  • 823
  • 1.03e3
  • 1.34e3
  • 1.42e3
96.51
  • 96.51
  • 95.64
  • 94.34
  • 93.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
942
  • 942
96.01
  • 96.01
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
944
  • 944
96.00
  • 96.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
994
  • 994
  • 1.19e3
  • 1.95e3
95.79
  • 95.79
  • 94.97
  • 91.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.01e3
  • 1.01e3
95.72
  • 95.72
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.11e3
  • 1.11e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.13e3
  • 1.13e3
95.22
  • 95.22
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.17e3
  • 1.17e3
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.20e3
  • 1.20e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.23e3
  • 1.23e3
  • 1.40e3
94.80
  • 94.80
  • 94.06
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
1.24e3
  • 1.24e3
  • 1.34e3
  • 1.55e3
  • 1.84e3
  • 4.79e3
94.73
  • 94.73
  • 94.32
  • 93.42
  • 92.21
  • 79.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.29e3
  • 1.29e3
94.53
  • 94.53
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.34e3
  • 1.34e3
94.30
  • 94.30
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.44e3
  • 1.44e3
93.90
  • 93.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.45e3
  • 1.45e3
  • 1.47e3
93.84
  • 93.84
  • 93.77
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
93.55
  • 93.55
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.71e3
  • 1.71e3
92.75
  • 92.75
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.72e3
  • 1.72e3
92.73
  • 92.73
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.83e3
  • 1.83e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.85e3
  • 1.85e3
92.15
  • 92.15
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.95e3
  • 1.95e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
2.13e3
  • 2.13e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
2.16e3
  • 2.16e3
  • 3.47e3
  • 1.24e4
90.87
  • 90.87
  • 85.28
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
2.16e3
  • 2.16e3
  • 4.15e3
90.83
  • 90.83
  • 82.41
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.20e3
  • 2.20e3
90.67
  • 90.67
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
2.22e3
  • 2.22e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
2.22e3
  • 2.22e3
90.58
  • 90.58
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
2.23e3
  • 2.23e3
90.57
  • 90.57
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.25e3
  • 2.25e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.37e3
  • 2.37e3
89.96
  • 89.96
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
2.43e3
  • 2.43e3
  • 3.66e3
  • 4.05e3
89.68
  • 89.68
  • 84.50
  • 82.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
2.61e3
  • 2.61e3
88.95
  • 88.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
2.98e3
  • 2.98e3
  • 4.08e3
  • 4.60e3
87.36
  • 87.36
  • 82.72
  • 80.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
3.39e3
  • 3.39e3
  • 6.36e3
  • 7.97e3
85.62
  • 85.62
  • 73.03
  • 66.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
3.69e3
  • 3.69e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
3.71e3
  • 3.71e3
84.28
  • 84.28
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
7.41e3
  • 7.41e3
68.58
  • 68.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Mammalia14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Bilateria24 species30 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000010345.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000010345.

Cross-references

EnsemblENSSSCG00000010345 (GHITM)
HGNCHGNC:17281 (GHITM)
EMBLCU633218
Uniprot/SPTREMBLF1SEQ3, F1SEQ3_PIG

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