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S. scrofa Gene: CLDN11 - ENSSSCG00000011747 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000011747
NameCLDN11
Descriptionclaudin 11 [Source:HGNC Symbol;Acc:HGNC:8514]
OrganismSus scrofa (pig)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
196
  • 196
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
198
  • 198
  • 455
  • 556
  • 701
99.17
  • 99.17
  • 98.08
  • 97.65
  • 97.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
233
  • 233
99.02
  • 99.02
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
246
  • 246
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
247
  • 247
  • 648
98.96
  • 98.96
  • 97.26
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
297
  • 297
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
328
  • 328
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
391
  • 391
  • 2.10e3
98.34
  • 98.34
  • 91.12
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
392
  • 392
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
428
  • 428
98.19
  • 98.19
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
464
  • 464
98.04
  • 98.04
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
868
  • 868
  • 1.98e3
96.32
  • 96.32
  • 91.62
AEIR
  • AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
930
  • 930
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.35e3
  • 1.35e3
  • 5.68e3
94.30
  • 94.30
  • 75.92
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
4.25e3
  • 4.25e3
81.98
  • 81.98
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.87e3
  • 4.87e3
  • 1.24e4
79.35
  • 79.35
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
5.10e3
  • 5.10e3
  • 1.26e4
78.38
  • 78.38
  • 46.64
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
5.31e3
  • 5.31e3
  • 7.50e3
  • 1.42e4
77.49
  • 77.49
  • 68.21
  • 39.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
7.60e3
  • 7.60e3
67.78
  • 67.78
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
8.65e3
  • 8.65e3
63.34
  • 63.34
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
9.59e3
  • 9.59e3
59.34
  • 59.34
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.80
  • 56.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
54.65
  • 54.65
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
51.59
  • 51.59
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.34e4
50.50
  • 50.50
  • 43.20
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.27e4
  • 1.27e4
  • 1.47e4
  • 1.56e4
  • 1.68e4
  • 1.75e4
46.08
  • 46.08
  • 37.54
  • 33.79
  • 28.92
  • 25.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
  • 1.59e4
  • 1.61e4
44.78
  • 44.78
  • 32.75
  • 31.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.95
  • 39.95
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
38.87
  • 38.87
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.46e4
  • 1.46e4
38.04
  • 38.04
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
  • 1.67e4
36.66
  • 36.66
  • 29.04
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
36.25
  • 36.25
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
35.61
  • 35.61
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.55e4
  • 1.55e4
  • 1.67e4
34.09
  • 34.09
  • 29.24
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
30.35
  • 30.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species17 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000011747.

Cross-references

EnsemblENSSSCG00000011747 (CLDN11)
EMBLCU928383, FJ873108
Uniprot/SPTREMBLC3VMK7, C3VMK7_PIG

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