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S. scrofa Gene: PHKA1 - ENSSSCG00000012411 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012411
NamePHKA1
Descriptionphosphorylase kinase, alpha 1 (muscle) [Source:HGNC Symbol;Acc:HGNC:8925]
OrganismSus scrofa (pig)
Synonym(s)phka
Orthologs(s)26 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
219
  • 219
  • 480
  • 581
  • 1.01e3
  • 8.15e3
99.07
  • 99.07
  • 97.97
  • 97.54
  • 95.72
  • 65.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
327
  • 327
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
359
  • 359
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.74e3
  • 1.74e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.79e3
  • 1.79e3
92.43
  • 92.43
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
2.15e3
  • 2.15e3
  • 3.57e3
  • 5.12e3
90.87
  • 90.87
  • 84.87
  • 78.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
4.08e3
  • 4.08e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
4.96e3
  • 4.96e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.61e3
  • 6.61e3
  • 1.17e4
71.98
  • 71.98
  • 50.33
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.87e3
  • 6.87e3
70.88
  • 70.88
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
7.02e3
  • 7.02e3
70.25
  • 70.25
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
7.17e3
  • 7.17e3
69.62
  • 69.62
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.27e3
  • 7.27e3
69.19
  • 69.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
7.31e3
  • 7.31e3
  • 7.35e3
  • 9.84e3
69.03
  • 69.03
  • 68.83
  • 58.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
7.39e3
  • 7.39e3
68.69
  • 68.69
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
7.39e3
  • 7.39e3
68.66
  • 68.66
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
7.87e3
  • 7.87e3
66.62
  • 66.62
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
8.16e3
  • 8.16e3
65.40
  • 65.40
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
8.39e3
  • 8.39e3
  • 8.51e3
  • 1.03e4
  • 1.04e4
64.46
  • 64.46
  • 63.93
  • 56.47
  • 55.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.40e3
  • 8.40e3
64.38
  • 64.38
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.57e3
  • 8.57e3
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
8.59e3
  • 8.59e3
  • 1.01e4
63.59
  • 63.59
  • 57.33
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
8.59e3
  • 8.59e3
63.57
  • 63.57
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
8.61e3
  • 8.61e3
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.80e3
  • 8.80e3
  • 1.08e4
62.69
  • 62.69
  • 54.27
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.92e3
  • 8.92e3
  • 9.76e3
  • 1.24e4
62.21
  • 62.21
  • 58.65
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.07e3
  • 9.07e3
61.54
  • 61.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
9.17e3
  • 9.17e3
  • 9.66e3
  • 1.00e4
61.12
  • 61.12
  • 59.06
  • 57.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
9.30e3
  • 9.30e3
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
9.39e3
  • 9.39e3
60.20
  • 60.20
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
9.47e3
  • 9.47e3
59.87
  • 59.87
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
9.53e3
  • 9.53e3
  • 9.83e3
59.63
  • 59.63
  • 58.32
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.63e3
  • 9.63e3
  • 1.02e4
  • 1.16e4
59.17
  • 59.17
  • 56.94
  • 50.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
59.16
  • 59.16
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
9.66e3
  • 9.66e3
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.70e3
  • 9.70e3
  • 9.89e3
58.88
  • 58.88
  • 58.07
AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.00e4
  • 1.00e4
57.45
  • 57.45
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.32
  • 57.32
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.70
  • 56.70
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.61
  • 55.61
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.47
  • 55.47
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.49
  • 54.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
  • 1.27e4
52.11
  • 52.11
  • 46.26
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.17e4
  • 1.25e4
51.52
  • 51.52
  • 50.35
  • 46.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.77
  • 45.77
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.76
  • 42.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000012411.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000012411.

Cross-references

EnsemblENSSSCG00000012411 (PHKA1)
HGNCHGNC:8925 (PHKA1)
EMBLCU466457
Uniprot/SPTREMBLF1RPM0, F1RPM0_PIG, I3L8R9, I3L8R9_PIG, I3LVF3, I3LVF3_PIG

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