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S. scrofa Gene: TBX22 - ENSSSCG00000012449 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012449
NameTBX22
DescriptionT-box 22 [Source:HGNC Symbol;Acc:HGNC:11600]
OrganismSus scrofa (pig)
Synonym(s)clpa, cpx
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
  • 2.00e4
45.88
  • 45.88
  • 15.02
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
45.77
  • 45.77
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
41.27
  • 41.27
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.58e4
  • 1.58e4
33.15
  • 33.15
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.66e4
  • 1.66e4
29.51
  • 29.51
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.79e4
  • 1.79e4
24.14
  • 24.14
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
  • 1.96e4
19.13
  • 19.13
  • 17.00
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.93e4
  • 1.93e4
18.30
  • 18.30
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
2.02e4
  • 2.02e4
14.45
  • 14.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000012449.

Cross-references

EnsemblENSSSCG00000012449 (TBX22)
HGNCHGNC:11600 (TBX22)
EMBLFP074891
Uniprot/SPTREMBLF1RPF2, F1RPF2_PIG, K7GM26, K7GM26_PIG, K7GS76, K7GS76_PIG

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