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S. scrofa Gene: NAP1L3 - ENSSSCG00000012504 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012504
NameNAP1L3
Descriptionnucleosome assembly protein 1-like 3 [Source:HGNC Symbol;Acc:HGNC:7639]
OrganismSus scrofa (pig)
Synonym(s)mb20, mgc26312, npl3
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
607
  • 607
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
617
  • 617
97.39
  • 97.39
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
656
  • 656
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
664
  • 664
97.19
  • 97.19
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
668
  • 668
97.17
  • 97.17
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
763
  • 763
96.77
  • 96.77
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
763
  • 763
  • 1.21e3
96.77
  • 96.77
  • 94.88
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
987
  • 987
  • 1.28e3
  • 1.48e3
  • 1.61e3
95.82
  • 95.82
  • 94.59
  • 93.71
  • 93.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.09e3
  • 1.09e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
94.97
  • 94.97
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.19e3
  • 1.19e3
  • 1.25e3
94.97
  • 94.97
  • 94.68
AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.81e3
  • 1.81e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.11e3
  • 2.11e3
91.08
  • 91.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
3.98e3
  • 3.98e3
  • 7.48e3
83.12
  • 83.12
  • 68.28
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
4.01e3
  • 4.01e3
82.99
  • 82.99
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
4.03e3
  • 4.03e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.60e3
  • 4.60e3
80.50
  • 80.50
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.72e3
  • 4.72e3
79.99
  • 79.99
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
5.59e3
  • 5.59e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
5.74e3
  • 5.74e3
  • 1.16e4
  • 1.19e4
75.66
  • 75.66
  • 51.00
  • 49.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
6.22e3
  • 6.22e3
73.65
  • 73.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
  • 8.22e3
72.95
  • 72.95
  • 65.16
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.20e3
  • 7.20e3
69.48
  • 69.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.07e3
  • 8.07e3
  • 8.89e3
65.79
  • 65.79
  • 62.32
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
8.11e3
  • 8.11e3
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
8.59e3
  • 8.59e3
63.61
  • 63.61
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.01e3
  • 9.01e3
  • 1.20e4
  • 1.24e4
61.80
  • 61.80
  • 49.30
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
9.38e3
  • 9.38e3
  • 1.07e4
  • 1.08e4
60.24
  • 60.24
  • 54.60
  • 54.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
  • 1.21e4
  • 1.28e4
56.97
  • 56.97
  • 48.61
  • 45.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
  • 1.05e4
56.59
  • 56.59
  • 55.68
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
  • 1.09e4
  • 1.15e4
56.57
  • 56.57
  • 53.68
  • 51.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
  • 1.04e4
  • 1.07e4
  • 1.09e4
  • 1.28e4
56.03
  • 56.03
  • 55.98
  • 54.67
  • 53.83
  • 45.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.43
  • 55.43
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.76
  • 54.76
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.07e4
  • 1.07e4
54.64
  • 54.64
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.09e4
  • 1.09e4
53.73
  • 53.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.30e4
  • 1.37e4
52.53
  • 52.53
  • 44.96
  • 41.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
50.64
  • 50.64
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
50.20
  • 50.20
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.30
  • 48.30
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
46.80
  • 46.80
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
46.55
  • 46.55
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.90
  • 44.90
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.83
  • 42.83
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.85
  • 39.85
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
36.47
  • 36.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSSSCG00000012504 (NAP1L3)
HGNCHGNC:7639 (NAP1L3)
EMBLCU861898
Uniprot/SPTREMBLI3LHB4, I3LHB4_PIG

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