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S. scrofa Gene: CH242-51F15.2 - ENSSSCG00000012531 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012531
NameCH242-51F15.2
Description-
OrganismSus scrofa (pig)
Orthologs(s)29 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
679
  • 679
  • 2.63e3
97.13
  • 97.13
  • 88.86
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
732
  • 732
  • 2.42e3
96.90
  • 96.90
  • 89.74
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.06e3
  • 1.06e3
  • 1.42e3
  • 1.46e3
  • 7.63e3
95.53
  • 95.53
  • 93.98
  • 93.84
  • 67.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.08e3
  • 1.08e3
95.43
  • 95.43
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.12e3
  • 1.12e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.45e3
  • 1.45e3
93.85
  • 93.85
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
2.62e3
  • 2.62e3
88.91
  • 88.91
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.80e3
  • 2.80e3
88.13
  • 88.13
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
3.26e3
  • 3.26e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.63e3
  • 3.63e3
84.60
  • 84.60
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
4.77e3
  • 4.77e3
79.77
  • 79.77
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
4.77e3
  • 4.77e3
79.77
  • 79.77
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.35e3
  • 6.35e3
73.09
  • 73.09
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
9.33e3
  • 9.33e3
60.44
  • 60.44
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.01e4
  • 1.01e4
  • 1.24e4
57.36
  • 57.36
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
53.60
  • 53.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
49.40
  • 49.40
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
49.17
  • 49.17
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.42e4
  • 1.53e4
48.16
  • 48.16
  • 39.62
  • 35.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
46.23
  • 46.23
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
  • 1.47e4
43.96
  • 43.96
  • 37.52
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
  • 1.94e4
40.73
  • 40.73
  • 17.86
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.87
  • 39.87
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
39.41
  • 39.41
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.44e4
  • 1.44e4
39.17
  • 39.17
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.49e4
  • 1.49e4
36.66
  • 36.66
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.94e4
33.99
  • 33.99
  • 17.90
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 2.18e4
33.50
  • 33.50
  • 7.71
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.63e4
  • 1.63e4
  • 1.67e4
  • 1.69e4
  • 1.82e4
  • 1.91e4
31.10
  • 31.10
  • 29.35
  • 28.37
  • 22.89
  • 19.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.77e4
  • 1.77e4
24.96
  • 24.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.83e4
  • 1.83e4
22.54
  • 22.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 2.06e4
22.12
  • 22.12
  • 12.74
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Cetartiodactyla2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000012531.

Cross-references

EnsemblENSSSCG00000012531 (CH242-51F15.2)
EMBLCU480760, CU929828
Uniprot/SPTREMBLF1RYC9, F1RYC9_PIG

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