We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: HTR2C - ENSSSCG00000012593 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012593
NameHTR2C
Description5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled [Source:HGNC Symbol;Acc:HGNC:5295]
OrganismSus scrofa (pig)
Synonym(s)5-ht2c, 5htr2c, htr1c
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
6.07e3
  • 6.07e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.40e3
  • 6.40e3
72.86
  • 72.86
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.89e3
  • 7.89e3
66.56
  • 66.56
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
9.98e3
  • 9.98e3
  • 1.15e4
  • 1.17e4
  • 1.21e4
57.70
  • 57.70
  • 51.46
  • 50.38
  • 48.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.45
  • 54.45
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.13e4
  • 1.13e4
51.98
  • 51.98
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
49.36
  • 49.36
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
47.92
  • 47.92
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.55
  • 47.55
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.89e4
41.70
  • 41.70
  • 19.98
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.55
  • 40.55
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.83e4
36.24
  • 36.24
  • 22.38
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
35.30
  • 35.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.65e4
  • 1.65e4
30.05
  • 30.05
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
26.80
  • 26.80
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
  • 1.95e4
25.73
  • 25.73
  • 17.26
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
21.92
  • 21.92
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.85e4
  • 1.85e4
21.75
  • 21.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.96e4
  • 1.96e4
17.10
  • 17.10
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.97e4
  • 1.97e4
16.36
  • 16.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000012593.

Cross-references

EnsemblENSSSCG00000012593 (HTR2C)
HGNCHGNC:5295 (HTR2C)
EMBLCU207399, CU606877, CU856526
Uniprot/SPTREMBLF1RWT6, F1RWT6_PIG, K7GSR7, K7GSR7_PIG

Do not show this banner again