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S. scrofa Gene: ATP2B3 - ENSSSCG00000012769 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012769
NameATP2B3
DescriptionATPase, Ca++ transporting, plasma membrane 3 [Source:HGNC Symbol;Acc:HGNC:816]
OrganismSus scrofa (pig)
Synonym(s)cfap39, cla2, pmca3, scax1
Orthologs(s)25 orthologs
Paralog(s)13 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.59e3
  • 1.59e3
  • 2.77e3
93.28
  • 93.28
  • 88.25
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.20e3
  • 2.20e3
  • 2.62e3
  • 3.69e3
  • 3.74e3
90.68
  • 90.68
  • 88.89
  • 84.36
  • 84.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
2.23e3
  • 2.23e3
90.56
  • 90.56
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.42e3
  • 3.42e3
  • 5.12e3
85.52
  • 85.52
  • 78.31
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
3.81e3
  • 3.81e3
83.86
  • 83.86
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
6.04e3
  • 6.04e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
6.13e3
  • 6.13e3
  • 7.75e3
  • 8.74e3
  • 9.70e3
  • 1.09e4
74.03
  • 74.03
  • 67.16
  • 62.98
  • 58.87
  • 53.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
6.19e3
  • 6.19e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.62e3
  • 6.62e3
71.93
  • 71.93
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
6.97e3
  • 6.97e3
70.48
  • 70.48
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
7.01e3
  • 7.01e3
70.31
  • 70.31
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
7.43e3
  • 7.43e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
8.11e3
  • 8.11e3
65.63
  • 65.63
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
8.24e3
  • 8.24e3
65.09
  • 65.09
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
8.86e3
  • 8.86e3
62.46
  • 62.46
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
9.05e3
  • 9.05e3
61.66
  • 61.66
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
9.47e3
  • 9.47e3
59.86
  • 59.86
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
9.64e3
  • 9.64e3
59.14
  • 59.14
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.30e4
56.41
  • 56.41
  • 44.79
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.29
  • 54.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.17e4
  • 1.41e4
52.84
  • 52.84
  • 50.37
  • 40.10
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
52.48
  • 52.48
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
  • 1.26e4
  • 1.42e4
48.94
  • 48.94
  • 46.61
  • 39.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
45.08
  • 45.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
  • 1.52e4
39.30
  • 39.30
  • 35.65
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
33.97
  • 33.97
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
33.25
  • 33.25
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
  • 1.67e4
29.58
  • 29.58
  • 29.39
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
28.78
  • 28.78
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
28.52
  • 28.52
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
28.29
  • 28.29
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 1.72e4
28.23
  • 28.23
  • 27.20
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000012769.

Paralogs (same species)

Cross-references

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