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S. scrofa Gene: CORO1B - ENSSSCG00000012920 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000012920
NameCORO1B
Descriptioncoronin, actin binding protein, 1B [Source:HGNC Symbol;Acc:HGNC:2253]
OrganismSus scrofa (pig)
Synonym(s)coronin-2
Orthologs(s)21 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
493
  • 493
  • 776
  • 1.44e3
97.91
  • 97.91
  • 96.71
  • 93.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.01e3
  • 1.01e3
  • 1.10e3
  • 8.55e3
95.74
  • 95.74
  • 95.33
  • 63.77
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.05e3
  • 1.05e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.47e3
  • 1.47e3
  • 1.84e3
  • 7.01e3
93.76
  • 93.76
  • 92.21
  • 70.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.51e3
  • 1.51e3
  • 8.30e3
  • 1.24e4
93.59
  • 93.59
  • 64.84
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.55e3
  • 1.55e3
  • 1.56e3
93.43
  • 93.43
  • 93.38
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.66e3
  • 1.66e3
  • 2.53e3
  • 8.66e3
92.97
  • 92.97
  • 89.30
  • 63.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.78e3
  • 1.78e3
92.45
  • 92.45
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.00e3
  • 2.00e3
91.52
  • 91.52
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.46
  • 91.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.19e3
  • 2.19e3
  • 1.18e4
90.70
  • 90.70
  • 49.80
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
2.39e3
  • 2.39e3
89.86
  • 89.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
2.63e3
  • 2.63e3
  • 8.51e3
88.84
  • 88.84
  • 63.93
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.69e3
  • 2.69e3
  • 1.01e4
88.59
  • 88.59
  • 57.33
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.73e3
  • 2.73e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
2.89e3
  • 2.89e3
  • 6.58e3
  • 7.22e3
  • 7.50e3
  • 1.11e4
87.76
  • 87.76
  • 72.13
  • 69.41
  • 68.19
  • 53.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.96e3
  • 2.96e3
87.47
  • 87.47
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.32e3
  • 3.32e3
  • 9.49e3
85.92
  • 85.92
  • 59.80
AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
3.35e3
  • 3.35e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
3.42e3
  • 3.42e3
85.50
  • 85.50
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.54e3
  • 3.54e3
  • 3.55e3
  • 3.85e3
  • 5.45e3
84.99
  • 84.99
  • 84.95
  • 83.67
  • 76.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.78e3
  • 3.78e3
83.99
  • 83.99
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
4.07e3
  • 4.07e3
82.75
  • 82.75
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
4.13e3
  • 4.13e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.31e3
  • 4.31e3
  • 4.61e3
  • 5.44e3
81.74
  • 81.74
  • 80.48
  • 76.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
4.49e3
  • 4.49e3
80.95
  • 80.95
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
4.63e3
  • 4.63e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.66e3
  • 4.66e3
80.26
  • 80.26
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
4.68e3
  • 4.68e3
80.17
  • 80.17
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.55e3
  • 5.55e3
76.47
  • 76.47
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
5.71e3
  • 5.71e3
75.80
  • 75.80
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
5.74e3
  • 5.74e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
6.05e3
  • 6.05e3
74.35
  • 74.35
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
6.14e3
  • 6.14e3
73.97
  • 73.97
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.25e3
  • 6.25e3
73.50
  • 73.50
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
6.97e3
  • 6.97e3
70.46
  • 70.46
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
7.32e3
  • 7.32e3
68.99
  • 68.99
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
7.38e3
  • 7.38e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
7.50e3
  • 7.50e3
68.20
  • 68.20
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.89e3
  • 7.89e3
66.54
  • 66.54
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.92e3
  • 7.92e3
66.42
  • 66.42
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
8.40e3
  • 8.40e3
64.41
  • 64.41
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
8.42e3
  • 8.42e3
64.33
  • 64.33
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
8.46e3
  • 8.46e3
64.13
  • 64.13
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
8.63e3
  • 8.63e3
63.44
  • 63.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
8.70e3
  • 8.70e3
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
9.24e3
  • 9.24e3
60.84
  • 60.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species11 genesCompare expression
Theria11 species12 genesCompare expression
Amniota13 species14 genesCompare expression
Bilateria20 species21 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000012920.

Paralogs (same species)

Paralogy information comes from OMA : ENSSSCG00000012920.

Cross-references

EnsemblENSSSCG00000012920 (CORO1B)
HGNCHGNC:2253 (CORO1B)
EMBLCU633429
Uniprot/SPTREMBLF1RUX1, F1RUX1_PIG

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