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S. scrofa Gene: FERMT3 - ENSSSCG00000013041 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013041
NameFERMT3
Descriptionfermitin family member 3 [Source:HGNC Symbol;Acc:HGNC:23151]
OrganismSus scrofa (pig)
Synonym(s)kind3, mgc10966, mig-2, mig2b, unc112c, urp2
Orthologs(s)28 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018685nursing stage
482
  • 482
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
694
  • 694
  • 753
  • 1.72e3
97.06
  • 97.06
  • 96.81
  • 92.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.42e3
  • 1.42e3
93.99
  • 93.99
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.72e3
  • 1.72e3
  • 2.26e3
  • 3.50e3
92.72
  • 92.72
  • 90.43
  • 85.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
4.90e3
  • 4.90e3
  • 6.21e3
79.22
  • 79.22
  • 73.66
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
5.30e3
  • 5.30e3
77.55
  • 77.55
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.39e3
  • 5.39e3
77.15
  • 77.15
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
6.46e3
  • 6.46e3
72.64
  • 72.64
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
6.84e3
  • 6.84e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
6.91e3
  • 6.91e3
70.72
  • 70.72
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
7.47e3
  • 7.47e3
  • 7.65e3
  • 1.04e4
68.32
  • 68.32
  • 67.60
  • 56.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
7.56e3
  • 7.56e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
8.20e3
  • 8.20e3
65.22
  • 65.22
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
8.57e3
  • 8.57e3
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
8.98e3
  • 8.98e3
  • 1.24e4
  • 1.31e4
61.92
  • 61.92
  • 47.51
  • 44.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
9.18e3
  • 9.18e3
61.07
  • 61.07
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
9.23e3
  • 9.23e3
60.89
  • 60.89
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.30e3
  • 9.30e3
  • 9.39e3
  • 1.11e4
60.59
  • 60.59
  • 60.20
  • 53.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
9.85e3
  • 9.85e3
58.24
  • 58.24
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
9.97e3
  • 9.97e3
  • 1.07e4
  • 1.13e4
  • 1.15e4
57.73
  • 57.73
  • 54.47
  • 51.97
  • 51.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
  • 1.04e4
  • 1.05e4
  • 1.08e4
  • 1.33e4
56.65
  • 56.65
  • 55.99
  • 55.61
  • 54.15
  • 43.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.06e4
  • 1.06e4
  • 1.40e4
54.91
  • 54.91
  • 40.59
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.07e4
  • 1.07e4
54.78
  • 54.78
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.45
  • 54.45
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
  • 1.20e4
54.29
  • 54.29
  • 49.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
53.51
  • 53.51
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.10e4
  • 1.10e4
53.38
  • 53.38
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.92
  • 51.92
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.14e4
  • 1.14e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
  • 1.49e4
50.11
  • 50.11
  • 36.97
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
49.51
  • 49.51
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
48.71
  • 48.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
45.97
  • 45.97
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.53
  • 45.53
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
45.34
  • 45.34
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
43.10
  • 43.10
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.34e4
  • 1.34e4
43.07
  • 43.07
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
42.02
  • 42.02
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.95
  • 41.95
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.94
  • 41.94
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.40
  • 41.40
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
40.01
  • 40.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.97
  • 39.97
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.67
  • 39.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species15 genesCompare expression
Bilateria21 species28 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000013041.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000013041.

Cross-references

EnsemblENSSSCG00000013041 (FERMT3)
HGNCHGNC:23151 (FERMT3)
EMBLFP312658
Uniprot/SPTREMBLF1RQ01, F1RQ01_PIG

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