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S. scrofa Gene: - ENSSSCG00000013057 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013057
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)10 orthologs
Paralog(s)26 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.36e3
  • 1.36e3
  • 1.77e3
  • 1.93e3
94.25
  • 94.25
  • 92.51
  • 91.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.57e3
  • 1.57e3
93.36
  • 93.36
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.78e3
  • 2.78e3
88.21
  • 88.21
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.82e3
  • 3.82e3
  • 5.48e3
83.82
  • 83.82
  • 76.77
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
4.19e3
  • 4.19e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
  • 1.92e4
28.56
  • 28.56
  • 18.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.75e4
  • 1.75e4
  • 1.92e4
25.98
  • 25.98
  • 18.50
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.82e4
  • 1.82e4
22.71
  • 22.71
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 2.17e4
21.83
  • 21.83
  • 8.06
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.92e4
  • 1.92e4
18.57
  • 18.57
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
17.85
  • 17.85
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.95e4
  • 1.95e4
  • 1.98e4
17.14
  • 17.14
  • 16.20
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSSSCG00000013057
Uniprot/SPTREMBLF1RPX6, F1RPX6_PIG

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