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S. scrofa Gene: DBX1 - ENSSSCG00000013350 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013350
NameDBX1
Descriptiondeveloping brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:33185]
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
8.38e3
  • 8.38e3
  • 1.76e4
  • 1.86e4
  • 1.89e4
  • 1.89e4
64.49
  • 64.49
  • 25.51
  • 21.23
  • 20.01
  • 19.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.14e4
  • 1.14e4
51.53
  • 51.53
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.57e4
  • 1.57e4
33.65
  • 33.65
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
1.69e4
  • 1.69e4
28.36
  • 28.36
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
17.83
  • 17.83
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.10e4
  • 2.10e4
  • 2.10e4
10.97
  • 10.97
  • 10.81
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000013350.

Cross-references

EnsemblENSSSCG00000013350 (DBX1)
HGNCHGNC:33185 (DBX1)
EMBLCU571227
Uniprot/SPTREMBLF1SFY4, F1SFY4_PIG

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