S. scrofa Gene: SHD - ENSSSCG00000013503 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013503
NameSHD
DescriptionSrc homology 2 domain containing transforming protein D [Source:HGNC Symbol;Acc:HGNC:30633]
OrganismSus scrofa (pig)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.87e3
  • 1.87e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
8.55e3
  • 8.55e3
  • 9.83e3
  • 1.47e4
63.76
  • 63.76
  • 58.34
  • 37.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
8.67e3
  • 8.67e3
63.26
  • 63.26
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.10e3
  • 9.10e3
61.41
  • 61.41
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
9.69e3
  • 9.69e3
58.94
  • 58.94
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.28
  • 57.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
56.70
  • 56.70
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.63
  • 55.63
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.19e4
50.98
  • 50.98
  • 50.86
  • 50.74
  • 49.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
47.87
  • 47.87
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.23e4
  • 1.23e4
47.75
  • 47.75
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.35e4
47.51
  • 47.51
  • 42.94
AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
47.07
  • 47.07
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
44.17
  • 44.17
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
  • 1.43e4
  • 1.47e4
  • 1.49e4
  • 1.71e4
43.98
  • 43.98
  • 39.50
  • 37.51
  • 36.73
  • 27.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.76e4
42.89
  • 42.89
  • 25.37
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.99
  • 41.99
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.86
  • 41.86
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.39e4
  • 1.39e4
  • 1.60e4
41.06
  • 41.06
  • 32.05
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.40e4
  • 1.40e4
40.47
  • 40.47
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.42e4
  • 1.42e4
39.68
  • 39.68
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
38.91
  • 38.91
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
37.66
  • 37.66
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
37.26
  • 37.26
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.50e4
  • 1.50e4
  • 1.56e4
36.56
  • 36.56
  • 33.90
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
34.32
  • 34.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
  • 1.74e4
34.08
  • 34.08
  • 26.07
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
31.96
  • 31.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
  • 1.78e4
31.16
  • 31.16
  • 24.48
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.89e4
  • 1.89e4
19.97
  • 19.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000013503.

Cross-references

EnsemblENSSSCG00000013503 (SHD)
HGNCHGNC:30633 (SHD)
EMBLCU929466
Uniprot/SPTREMBLF1S7M3, F1S7M3_PIG

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