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S. scrofa Gene: STXBP2 - ENSSSCG00000013576 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013576
NameSTXBP2
Descriptionsyntaxin binding protein 2 [Source:HGNC Symbol;Acc:HGNC:11445]
OrganismSus scrofa (pig)
Synonym(s)hunc18b, unc18b
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018685nursing stage
421
  • 421
98.22
  • 98.22
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
932
  • 932
  • 4.63e3
  • 5.87e3
96.05
  • 96.05
  • 80.36
  • 75.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.31e3
  • 1.31e3
  • 1.56e3
  • 3.07e3
94.47
  • 94.47
  • 93.40
  • 86.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.33e3
  • 1.33e3
  • 1.33e3
  • 4.34e3
94.36
  • 94.36
  • 94.35
  • 81.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.66e3
  • 1.66e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.71e3
  • 1.71e3
  • 4.80e3
92.74
  • 92.74
  • 79.65
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
2.38e3
  • 2.38e3
89.91
  • 89.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.72e3
  • 2.72e3
  • 5.04e3
88.47
  • 88.47
  • 78.66
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
2.82e3
  • 2.82e3
88.04
  • 88.04
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
3.04e3
  • 3.04e3
87.13
  • 87.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
3.08e3
  • 3.08e3
  • 4.53e3
  • 4.81e3
86.94
  • 86.94
  • 80.82
  • 79.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
3.19e3
  • 3.19e3
86.46
  • 86.46
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
3.46e3
  • 3.46e3
85.35
  • 85.35
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
3.46e3
  • 3.46e3
85.33
  • 85.33
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
3.88e3
  • 3.88e3
83.57
  • 83.57
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
3.90e3
  • 3.90e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.17e3
  • 4.17e3
82.34
  • 82.34
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
4.20e3
  • 4.20e3
82.22
  • 82.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
6.09e3
  • 6.09e3
  • 9.00e3
74.18
  • 74.18
  • 61.84
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
6.30e3
  • 6.30e3
  • 6.39e3
73.30
  • 73.30
  • 72.92
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
7.03e3
  • 7.03e3
  • 1.18e4
  • 1.24e4
70.21
  • 70.21
  • 49.91
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
7.03e3
  • 7.03e3
70.20
  • 70.20
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
8.58e3
  • 8.58e3
63.62
  • 63.62
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.72e3
  • 8.72e3
63.05
  • 63.05
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.28e3
  • 9.28e3
60.66
  • 60.66
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
  • 1.16e4
  • 1.52e4
57.10
  • 57.10
  • 50.97
  • 35.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
56.18
  • 56.18
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.57
  • 55.57
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
47.82
  • 47.82
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
  • 1.28e4
  • 1.35e4
  • 1.37e4
  • 1.40e4
47.21
  • 47.21
  • 45.62
  • 42.77
  • 41.85
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.25e4
  • 1.25e4
46.93
  • 46.93
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
  • 1.62e4
  • 1.67e4
  • 1.71e4
41.42
  • 41.42
  • 31.45
  • 29.16
  • 27.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
40.87
  • 40.87
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
37.69
  • 37.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
37.45
  • 37.45
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
36.08
  • 36.08
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
34.21
  • 34.21
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.75e4
  • 1.75e4
25.83
  • 25.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000013576.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000013576.

Cross-references

EnsemblENSSSCG00000013576 (STXBP2)
HGNCHGNC:11445 (STXBP2)
EMBLCU929919
Uniprot/SPTREMBLF1SCI9, F1SCI9_PIG

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