S. scrofa Gene: CALR - ENSSSCG00000013746 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013746
NameCALR
Descriptioncalreticulin [Source:HGNC Symbol;Acc:HGNC:1455]
OrganismSus scrofa (pig)
Synonym(s)calregulin, cc1qr, crp55, crt, d4n5n1, erp60, flj26680, hacbp, ro, ssa

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
143
  • 143
  • 328
99.39
  • 99.39
  • 98.59
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
151
  • 151
  • 275
99.35
  • 99.35
  • 98.82
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
159
  • 159
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
171
  • 171
99.27
  • 99.27
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
180
  • 180
  • 393
99.23
  • 99.23
  • 98.32
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
180
  • 180
  • 194
99.23
  • 99.23
  • 99.17
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
192
  • 192
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
192
  • 192
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
200
  • 200
  • 224
  • 252
99.14
  • 99.14
  • 99.04
  • 98.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
260
  • 260
98.88
  • 98.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
267
  • 267
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
286
  • 286
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
316
  • 316
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
326
  • 326
98.60
  • 98.60
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
329
  • 329
98.59
  • 98.59
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
352
  • 352
  • 447
  • 465
98.49
  • 98.49
  • 98.08
  • 98.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
354
  • 354
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
358
  • 358
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
363
  • 363
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
388
  • 388
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
395
  • 395
98.31
  • 98.31
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
406
  • 406
98.26
  • 98.26
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
413
  • 413
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
415
  • 415
98.22
  • 98.22
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
427
  • 427
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
428
  • 428
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
441
  • 441
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
451
  • 451
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
472
  • 472
  • 642
97.98
  • 97.98
  • 97.24
AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
477
  • 477
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
489
  • 489
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
527
  • 527
97.74
  • 97.74
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
553
  • 553
  • 604
  • 610
97.62
  • 97.62
  • 97.41
  • 97.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
599
  • 599
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
622
  • 622
97.33
  • 97.33
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
680
  • 680
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.11e3
  • 1.11e3
95.22
  • 95.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU463133, F14591, GQ984146
EnsemblENSSSCG00000013746 (CALR)
HGNCHGNC:1455 (CALR)
Uniprot/SWISSPROTCALR_PIG, P28491

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