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S. scrofa Gene: B3GNT3 - ENSSSCG00000013886 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000013886
NameB3GNT3
DescriptionUDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:13528]
OrganismSus scrofa (pig)
Synonym(s)b3gn-t3, b3gnt-3, beta3gn-t3, hp10328, tmem3
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
94.18
  • 94.18
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
2.05e3
  • 2.05e3
  • 2.50e3
  • 7.92e3
91.33
  • 91.33
  • 89.42
  • 66.43
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
2.60e3
  • 2.60e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
3.50e3
  • 3.50e3
85.16
  • 85.16
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
3.52e3
  • 3.52e3
  • 1.20e4
  • 1.24e4
85.07
  • 85.07
  • 49.27
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.74e3
  • 3.74e3
  • 4.44e3
  • 8.49e3
84.14
  • 84.14
  • 81.17
  • 64.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
4.05e3
  • 4.05e3
  • 4.31e3
82.84
  • 82.84
  • 81.75
AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
4.73e3
  • 4.73e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
5.28e3
  • 5.28e3
77.60
  • 77.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
6.06e3
  • 6.06e3
  • 6.66e3
  • 7.77e3
74.31
  • 74.31
  • 71.76
  • 67.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
6.45e3
  • 6.45e3
72.67
  • 72.67
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
7.55e3
  • 7.55e3
  • 9.12e3
  • 9.90e3
  • 9.90e3
  • 1.10e4
67.99
  • 67.99
  • 61.35
  • 58.06
  • 58.02
  • 53.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
7.56e3
  • 7.56e3
67.95
  • 67.95
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
7.91e3
  • 7.91e3
  • 1.19e4
66.46
  • 66.46
  • 49.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
8.78e3
  • 8.78e3
  • 9.50e3
62.80
  • 62.80
  • 59.72
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
8.92e3
  • 8.92e3
62.19
  • 62.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.33e3
  • 9.33e3
  • 1.01e4
  • 1.09e4
60.45
  • 60.45
  • 57.22
  • 53.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
57.09
  • 57.09
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.44
  • 55.44
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
54.47
  • 54.47
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.87
  • 53.87
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.64
  • 53.64
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.13e4
  • 1.13e4
52.23
  • 52.23
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
51.57
  • 51.57
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.96
  • 50.96
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.88
  • 48.88
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
48.25
  • 48.25
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
48.14
  • 48.14
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.11
  • 48.11
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
47.02
  • 47.02
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.25e4
  • 1.25e4
  • 1.28e4
  • 1.32e4
  • 1.33e4
46.91
  • 46.91
  • 45.77
  • 44.15
  • 43.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
46.75
  • 46.75
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.94
  • 44.94
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.32e4
  • 1.32e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
42.17
  • 42.17
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.20
  • 39.20
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.44e4
  • 1.44e4
38.93
  • 38.93
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.45e4
  • 1.45e4
38.33
  • 38.33
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.49e4
  • 1.49e4
36.96
  • 36.96
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
36.22
  • 36.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
34.10
  • 34.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Tetrapoda13 species14 genesCompare expression
Euteleostomi14 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000013886.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000013886.

Cross-references

EnsemblENSSSCG00000013886 (B3GNT3)
HGNCHGNC:13528 (B3GNT3)
EMBLCU928970
Uniprot/SPTREMBLF1S937, F1S937_PIG

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