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S. scrofa Gene: - ENSSSCG00000014071 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000014071
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)29 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
127
  • 127
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
134
  • 134
99.43
  • 99.43
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
135
  • 135
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
154
  • 154
  • 318
  • 369
99.35
  • 99.35
  • 98.66
  • 98.44
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
167
  • 167
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
178
  • 178
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
192
  • 192
  • 1.04e3
  • 1.24e4
99.19
  • 99.19
  • 95.60
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
192
  • 192
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
196
  • 196
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
202
  • 202
  • 203
  • 1.15e3
99.15
  • 99.15
  • 99.14
  • 95.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
215
  • 215
  • 217
  • 652
99.09
  • 99.09
  • 99.08
  • 97.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
241
  • 241
  • 251
  • 462
98.98
  • 98.98
  • 98.94
  • 98.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
247
  • 247
98.96
  • 98.96
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
249
  • 249
  • 263
  • 312
  • 387
  • 396
98.95
  • 98.95
  • 98.89
  • 98.68
  • 98.36
  • 98.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
252
  • 252
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
270
  • 270
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
290
  • 290
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
300
  • 300
  • 322
98.73
  • 98.73
  • 98.64
AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
308
  • 308
98.70
  • 98.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
354
  • 354
  • 1.75e3
98.50
  • 98.50
  • 92.59
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
364
  • 364
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
373
  • 373
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
380
  • 380
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
382
  • 382
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
432
  • 432
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
439
  • 439
98.14
  • 98.14
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
442
  • 442
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
443
  • 443
98.13
  • 98.13
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
444
  • 444
98.12
  • 98.12
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
452
  • 452
  • 936
98.09
  • 98.09
  • 96.04
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
458
  • 458
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
458
  • 458
  • 2.28e3
98.06
  • 98.06
  • 90.35
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
510
  • 510
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
516
  • 516
  • 596
  • 1.91e3
97.82
  • 97.82
  • 97.48
  • 91.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
518
  • 518
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
525
  • 525
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
539
  • 539
  • 996
97.72
  • 97.72
  • 95.78
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
542
  • 542
  • 790
  • 858
  • 1.08e3
97.71
  • 97.71
  • 96.65
  • 96.37
  • 95.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
629
  • 629
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
739
  • 739
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
740
  • 740
96.87
  • 96.87
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
754
  • 754
96.81
  • 96.81
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
822
  • 822
96.52
  • 96.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
823
  • 823
  • 989
96.52
  • 96.52
  • 95.81
AEIR
  • AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
834
  • 834
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
836
  • 836
96.46
  • 96.46
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
893
  • 893
96.22
  • 96.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species15 genesCompare expression
Theria13 species16 genesCompare expression
Mammalia14 species17 genesCompare expression
Amniota16 species20 genesCompare expression
Tetrapoda17 species21 genesCompare expression
Euteleostomi18 species22 genesCompare expression
Bilateria25 species29 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000014071.

Cross-references

EnsemblENSSSCG00000014071
EMBLCU694283
Uniprot/SPTREMBLF2Z5H8, F2Z5H8_PIG

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