We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: OTP - ENSSSCG00000014099 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000014099
NameOTP
Descriptionorthopedia homeobox [Source:HGNC Symbol;Acc:HGNC:8518]
OrganismSus scrofa (pig)
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
7.66e3
  • 7.66e3
67.54
  • 67.54
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
51.94
  • 51.94
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.64e4
47.51
  • 47.51
  • 30.49
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.72e4
  • 1.79e4
40.05
  • 40.05
  • 26.91
  • 24.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.44e4
  • 1.44e4
38.87
  • 38.87
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.48e4
  • 1.48e4
  • 1.67e4
  • 1.94e4
  • 2.00e4
37.31
  • 37.31
  • 29.19
  • 17.90
  • 15.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
34.89
  • 34.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
  • 1.79e4
34.80
  • 34.80
  • 24.33
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
33.63
  • 33.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
1.60e4
  • 1.60e4
32.28
  • 32.28
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.63e4
  • 1.63e4
30.77
  • 30.77
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
  • 1.76e4
29.81
  • 29.81
  • 25.43
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
28.31
  • 28.31
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.70e4
  • 1.70e4
27.96
  • 27.96
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.71e4
  • 1.71e4
27.37
  • 27.37
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
  • 1.75e4
  • 1.77e4
  • 1.92e4
26.64
  • 26.64
  • 25.65
  • 25.15
  • 18.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.76e4
  • 1.76e4
25.20
  • 25.20
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
24.18
  • 24.18
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
23.17
  • 23.17
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.87e4
  • 1.87e4
20.76
  • 20.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
  • 2.18e4
18.96
  • 18.96
  • 7.71
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.95e4
  • 1.95e4
17.32
  • 17.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000014099.

Cross-references

EnsemblENSSSCG00000014099 (OTP)
HGNCHGNC:8518 (OTP)
EMBLCU856635
Uniprot/SPTREMBLF2Z5H5, F2Z5H5_PIG

Do not show this banner again