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S. scrofa Gene: TMEM161B - ENSSSCG00000014148 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000014148
NameTMEM161B
Descriptiontransmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
OrganismSus scrofa (pig)
Synonym(s)mgc33214
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
2.55e3
  • 2.55e3
  • 7.67e3
89.18
  • 89.18
  • 67.50
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
3.36e3
  • 3.36e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
3.60e3
  • 3.60e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.91e3
  • 3.91e3
  • 8.54e3
83.44
  • 83.44
  • 63.82
AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
3.91e3
  • 3.91e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
4.01e3
  • 4.01e3
  • 8.92e3
  • 9.67e3
83.03
  • 83.03
  • 62.17
  • 59.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.05e3
  • 4.05e3
  • 8.62e3
  • 9.25e3
82.84
  • 82.84
  • 63.46
  • 60.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
4.19e3
  • 4.19e3
82.22
  • 82.22
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
4.24e3
  • 4.24e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
4.27e3
  • 4.27e3
81.90
  • 81.90
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
4.53e3
  • 4.53e3
80.78
  • 80.78
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
4.57e3
  • 4.57e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
4.65e3
  • 4.65e3
80.27
  • 80.27
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
4.75e3
  • 4.75e3
79.89
  • 79.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
4.79e3
  • 4.79e3
  • 5.72e3
79.70
  • 79.70
  • 75.78
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
4.82e3
  • 4.82e3
79.56
  • 79.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.94e3
  • 4.94e3
  • 5.58e3
  • 6.16e3
79.06
  • 79.06
  • 76.36
  • 73.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
4.99e3
  • 4.99e3
78.86
  • 78.86
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
5.01e3
  • 5.01e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
5.18e3
  • 5.18e3
78.05
  • 78.05
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
5.29e3
  • 5.29e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
5.36e3
  • 5.36e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
5.50e3
  • 5.50e3
76.68
  • 76.68
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
5.56e3
  • 5.56e3
76.45
  • 76.45
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.68e3
  • 5.68e3
  • 7.71e3
  • 8.85e3
  • 9.42e3
  • 1.18e4
75.94
  • 75.94
  • 67.30
  • 62.48
  • 60.09
  • 49.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
5.72e3
  • 5.72e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.80e3
  • 5.80e3
  • 7.32e3
75.43
  • 75.43
  • 68.96
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
5.92e3
  • 5.92e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.00e3
  • 6.00e3
74.57
  • 74.57
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
6.21e3
  • 6.21e3
  • 8.05e3
73.69
  • 73.69
  • 65.90
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.46e3
  • 6.46e3
72.61
  • 72.61
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
6.60e3
  • 6.60e3
72.03
  • 72.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
7.02e3
  • 7.02e3
  • 8.54e3
  • 9.35e3
70.24
  • 70.24
  • 63.79
  • 60.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.22e3
  • 7.22e3
  • 9.32e3
  • 9.57e3
  • 1.06e4
69.41
  • 69.41
  • 60.48
  • 59.44
  • 55.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
7.28e3
  • 7.28e3
69.14
  • 69.14
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
7.47e3
  • 7.47e3
68.35
  • 68.35
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
8.11e3
  • 8.11e3
65.63
  • 65.63
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
8.49e3
  • 8.49e3
  • 1.01e4
  • 1.24e4
64.01
  • 64.01
  • 57.26
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.65e3
  • 8.65e3
63.35
  • 63.35
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
8.68e3
  • 8.68e3
63.21
  • 63.21
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
8.74e3
  • 8.74e3
62.96
  • 62.96
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
8.81e3
  • 8.81e3
62.67
  • 62.67
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
8.87e3
  • 8.87e3
62.42
  • 62.42
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.94e3
  • 8.94e3
62.11
  • 62.11
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.16e3
  • 9.16e3
61.17
  • 61.17
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
9.41e3
  • 9.41e3
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.50e3
  • 9.50e3
  • 1.04e4
  • 1.19e4
59.72
  • 59.72
  • 55.88
  • 49.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.01e4
  • 1.01e4
57.26
  • 57.26
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.15e4
55.17
  • 55.17
  • 51.23
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000014148.

Cross-references

EnsemblENSSSCG00000014148 (TMEM161B)
HGNCHGNC:28483 (TMEM161B)
EMBLCU928833, FP003597
Uniprot/SPTREMBLF1RP00, F1RP00_PIG

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