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S. scrofa Gene: - ENSSSCG00000014368 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000014368
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)9 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
3.63e3
  • 3.63e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.08e3
  • 6.08e3
  • 7.50e3
  • 7.56e3
74.23
  • 74.23
  • 68.23
  • 67.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
  • 1.12e4
55.64
  • 55.64
  • 52.42
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.62e4
47.51
  • 47.51
  • 31.39
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.44e4
  • 1.49e4
46.99
  • 46.99
  • 38.91
  • 36.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
45.70
  • 45.70
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
  • 1.42e4
  • 1.44e4
  • 1.50e4
  • 1.50e4
41.38
  • 41.38
  • 39.95
  • 38.78
  • 36.36
  • 36.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
35.12
  • 35.12
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
35.05
  • 35.05
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.57e4
  • 1.65e4
  • 1.71e4
34.24
  • 34.24
  • 33.29
  • 30.01
  • 27.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.56e4
  • 1.56e4
33.93
  • 33.93
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.56e4
  • 1.56e4
  • 1.63e4
33.85
  • 33.85
  • 31.03
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.57e4
  • 1.57e4
33.57
  • 33.57
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.57e4
  • 1.57e4
33.26
  • 33.26
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
32.17
  • 32.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
31.96
  • 31.96
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.61e4
  • 1.61e4
31.61
  • 31.61
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
31.58
  • 31.58
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.65e4
  • 1.65e4
  • 1.67e4
29.90
  • 29.90
  • 29.10
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
29.81
  • 29.81
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
29.66
  • 29.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.13
  • 29.13
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
28.11
  • 28.11
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
  • 1.78e4
26.79
  • 26.79
  • 24.51
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
25.65
  • 25.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSSSCG00000014368
EMBLCU459055
Uniprot/SPTREMBLF1RGE5, F1RGE5_PIG

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