We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: - ENSSSCG00000014565 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000014565
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)10 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
460
  • 460
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
643
  • 643
  • 855
  • 1.00e3
97.28
  • 97.28
  • 96.38
  • 95.76
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
844
  • 844
  • 1.66e3
96.43
  • 96.43
  • 92.99
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
981
  • 981
  • 7.92e3
  • 1.24e4
95.85
  • 95.85
  • 66.42
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.35e3
  • 1.35e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.38e3
  • 1.38e3
  • 2.39e3
  • 6.20e3
94.17
  • 94.17
  • 89.86
  • 73.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.56e3
  • 1.56e3
  • 3.25e3
  • 1.01e4
93.38
  • 93.38
  • 86.21
  • 57.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.67e3
  • 1.67e3
  • 4.21e3
  • 1.00e4
92.92
  • 92.92
  • 82.14
  • 57.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.96e3
  • 1.96e3
91.71
  • 91.71
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
2.08e3
  • 2.08e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
2.10e3
  • 2.10e3
91.10
  • 91.10
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
2.21e3
  • 2.21e3
90.64
  • 90.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
  • 2.51e3
  • 2.70e3
89.66
  • 89.66
  • 89.35
  • 88.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
2.52e3
  • 2.52e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.56e3
  • 2.56e3
89.17
  • 89.17
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.19e3
  • 3.19e3
  • 9.63e3
86.50
  • 86.50
  • 59.18
AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
3.50e3
  • 3.50e3
85.16
  • 85.16
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
3.86e3
  • 3.86e3
  • 4.70e3
  • 5.13e3
  • 5.97e3
  • 8.56e3
83.66
  • 83.66
  • 80.10
  • 78.27
  • 74.69
  • 63.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
3.96e3
  • 3.96e3
83.20
  • 83.20
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.06e3
  • 4.06e3
82.77
  • 82.77
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
4.28e3
  • 4.28e3
81.86
  • 81.86
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
4.51e3
  • 4.51e3
80.87
  • 80.87
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.57e3
  • 4.57e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
4.81e3
  • 4.81e3
79.61
  • 79.61
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
5.10e3
  • 5.10e3
78.38
  • 78.38
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
5.66e3
  • 5.66e3
76.00
  • 76.00
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
6.12e3
  • 6.12e3
  • 7.75e3
  • 8.79e3
  • 9.62e3
74.04
  • 74.04
  • 67.16
  • 62.75
  • 59.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
6.46e3
  • 6.46e3
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.71e3
  • 6.71e3
  • 1.07e4
71.57
  • 71.57
  • 54.45
AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
6.74e3
  • 6.74e3
71.45
  • 71.45
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.92e3
  • 6.92e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
6.97e3
  • 6.97e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
7.00e3
  • 7.00e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
69.09
  • 69.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
7.70e3
  • 7.70e3
  • 9.96e3
67.34
  • 67.34
  • 57.79
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
7.83e3
  • 7.83e3
66.83
  • 66.83
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
8.34e3
  • 8.34e3
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
8.67e3
  • 8.67e3
63.25
  • 63.25
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
8.69e3
  • 8.69e3
63.17
  • 63.17
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
8.91e3
  • 8.91e3
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.06e3
  • 9.06e3
61.60
  • 61.60
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.93e3
  • 9.93e3
  • 1.42e4
57.90
  • 57.90
  • 39.95
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
9.95e3
  • 9.95e3
57.84
  • 57.84
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
9.97e3
  • 9.97e3
57.74
  • 57.74
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
56.87
  • 56.87
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
56.08
  • 56.08
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
55.34
  • 55.34
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.42
  • 54.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSSSCG00000014565
EMBLCU928488
Uniprot/SPTREMBLF1RGC4, F1RGC4_PIG

Do not show this banner again