S. scrofa Gene: BSX - ENSSSCG00000015139 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000015139
NameBSX
Descriptionbrain specific homeobox [Source:HGNC Symbol;Acc:HGNC:20450]
OrganismSus scrofa (pig)
Synonym(s)bsx1
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
5.50e3
  • 5.50e3
76.68
  • 76.68
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.86e4
  • 1.86e4
21.36
  • 21.36
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.89e4
  • 1.89e4
  • 1.96e4
20.02
  • 20.02
  • 17.10
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000015139.

Cross-references

EnsemblENSSSCG00000015139 (BSX)
HGNCHGNC:20450 (BSX)
EMBLCU570649
Uniprot/SPTREMBLF1S9Q4, F1S9Q4_PIG

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