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S. scrofa Gene: NTM - ENSSSCG00000015253 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000015253
NameNTM
Descriptionneurotrimin [Source:HGNC Symbol;Acc:HGNC:17941]
OrganismSus scrofa (pig)
Synonym(s)hnt, iglon2, ntri
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
942
  • 942
  • 1.65e3
96.01
  • 96.01
  • 93.00
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.16e3
  • 1.16e3
  • 1.20e3
  • 1.61e3
  • 1.62e3
95.08
  • 95.08
  • 94.92
  • 93.20
  • 93.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.26e3
  • 1.26e3
  • 1.43e3
94.67
  • 94.67
  • 93.94
AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.39e3
  • 1.39e3
94.12
  • 94.12
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.43e3
  • 1.43e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.46e3
  • 1.46e3
93.81
  • 93.81
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.70e3
  • 1.70e3
92.81
  • 92.81
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
2.11e3
  • 2.11e3
91.06
  • 91.06
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.15e3
  • 2.15e3
90.89
  • 90.89
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
2.64e3
  • 2.64e3
88.79
  • 88.79
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
3.23e3
  • 3.23e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
3.25e3
  • 3.25e3
86.22
  • 86.22
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
4.93e3
  • 4.93e3
79.13
  • 79.13
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
8.29e3
  • 8.29e3
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.83e3
  • 8.83e3
  • 1.35e4
62.58
  • 62.58
  • 42.62
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.46
  • 54.46
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.31e4
49.94
  • 49.94
  • 44.45
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
49.29
  • 49.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.49e4
  • 1.52e4
47.90
  • 47.90
  • 37.02
  • 35.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.62
  • 47.62
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.24e4
47.51
  • 47.51
  • 47.50
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
  • 1.31e4
  • 1.35e4
  • 1.41e4
  • 1.61e4
45.26
  • 45.26
  • 44.67
  • 42.95
  • 40.14
  • 31.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
42.96
  • 42.96
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.36e4
  • 1.36e4
42.34
  • 42.34
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
  • 1.66e4
36.55
  • 36.55
  • 29.44
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
34.42
  • 34.42
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
  • 1.71e4
31.59
  • 31.59
  • 27.60
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
31.56
  • 31.56
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.34
  • 29.34
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.68e4
  • 1.68e4
28.74
  • 28.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
  • 1.76e4
26.82
  • 26.82
  • 25.45
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.82e4
  • 1.82e4
22.70
  • 22.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000015253.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000015253.

Cross-references

EnsemblENSSSCG00000015253 (NTM)
HGNCHGNC:17941 (NTM)
EMBLCU464171, CU694882
Uniprot/SPTREMBLF1S6D0, F1S6D0_PIG

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