S. scrofa Gene: SLC4A10 - ENSSSCG00000015893 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000015893
NameSLC4A10
Descriptionsolute carrier family 4, sodium bicarbonate transporter, member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
OrganismSus scrofa (pig)
Synonym(s)nbcn2, ncbe
Orthologs(s)26 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
981
  • 981
  • 3.95e3
95.85
  • 95.85
  • 83.24
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.20e3
  • 1.20e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.35e3
  • 1.35e3
  • 2.38e3
94.30
  • 94.30
  • 89.90
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.87e3
  • 1.87e3
92.07
  • 92.07
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.89e3
  • 1.89e3
91.97
  • 91.97
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.08e3
  • 2.08e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.25e3
  • 2.25e3
  • 2.58e3
  • 2.76e3
  • 2.98e3
90.47
  • 90.47
  • 89.07
  • 88.32
  • 87.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.42e3
  • 2.42e3
89.75
  • 89.75
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.72e3
  • 2.72e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
3.03e3
  • 3.03e3
87.16
  • 87.16
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.49e3
  • 3.49e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.51e3
  • 3.51e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
3.98e3
  • 3.98e3
83.15
  • 83.15
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
  • 1.26e4
51.19
  • 51.19
  • 46.64
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.36e4
  • 1.36e4
  • 1.38e4
  • 1.53e4
  • 1.54e4
  • 1.67e4
42.44
  • 42.44
  • 41.37
  • 35.31
  • 34.53
  • 29.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.40e4
  • 1.40e4
40.59
  • 40.59
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
35.47
  • 35.47
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
32.99
  • 32.99
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.59e4
  • 1.59e4
  • 1.63e4
32.66
  • 32.66
  • 31.09
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
32.47
  • 32.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.62e4
  • 1.69e4
32.08
  • 32.08
  • 31.18
  • 28.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.62e4
  • 1.62e4
  • 1.84e4
  • 2.06e4
31.31
  • 31.31
  • 21.89
  • 12.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
30.27
  • 30.27
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
  • 1.83e4
24.75
  • 24.75
  • 22.56
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.89e4
  • 1.89e4
19.99
  • 19.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
19.07
  • 19.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000015893.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria4 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000015893.

Cross-references

EnsemblENSSSCG00000015893 (SLC4A10)
HGNCHGNC:13811 (SLC4A10)
EMBLCU928757
Uniprot/SPTREMBLF1RPQ2, F1RPQ2_PIG, I3LIN1, I3LIN1_PIG, I3LPA8, I3LPA8_PIG

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