We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: GTF3C3 - ENSSSCG00000016070 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016070
NameGTF3C3
Descriptiongeneral transcription factor IIIC subunit 3 [Source:HGNC Symbol;Acc:HGNC:4666]
OrganismSus scrofa (pig)
Synonym(s)tfiiic102, tfiiic2-102
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
3.41e3
  • 3.41e3
  • 7.37e3
85.55
  • 85.55
  • 68.78
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.52e3
  • 3.52e3
  • 7.02e3
  • 1.24e4
85.07
  • 85.07
  • 70.25
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.68e3
  • 3.68e3
84.41
  • 84.41
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.79e3
  • 3.79e3
83.95
  • 83.95
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
4.40e3
  • 4.40e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.47e3
  • 4.47e3
  • 6.91e3
  • 7.08e3
81.07
  • 81.07
  • 70.72
  • 70.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
4.94e3
  • 4.94e3
79.05
  • 79.05
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
4.95e3
  • 4.95e3
79.04
  • 79.04
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.95e3
  • 4.95e3
  • 7.53e3
  • 8.26e3
79.00
  • 79.00
  • 68.09
  • 65.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.05e3
  • 5.05e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
5.09e3
  • 5.09e3
78.43
  • 78.43
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
5.15e3
  • 5.15e3
  • 7.79e3
  • 8.39e3
  • 8.61e3
  • 9.02e3
78.19
  • 78.19
  • 67.00
  • 64.46
  • 63.50
  • 61.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
5.29e3
  • 5.29e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.57e3
  • 5.57e3
  • 8.87e3
76.41
  • 76.41
  • 62.42
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.68e3
  • 5.68e3
  • 7.19e3
75.91
  • 75.91
  • 69.51
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.71e3
  • 5.71e3
  • 7.89e3
75.80
  • 75.80
  • 66.57
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
5.73e3
  • 5.73e3
75.71
  • 75.71
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
5.74e3
  • 5.74e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
5.86e3
  • 5.86e3
  • 7.19e3
  • 9.80e3
75.18
  • 75.18
  • 69.51
  • 58.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
5.88e3
  • 5.88e3
75.10
  • 75.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
5.90e3
  • 5.90e3
  • 8.57e3
74.99
  • 74.99
  • 63.69
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
5.97e3
  • 5.97e3
  • 7.38e3
  • 7.70e3
74.68
  • 74.68
  • 68.73
  • 67.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
6.11e3
  • 6.11e3
74.11
  • 74.11
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.27e3
  • 6.27e3
73.41
  • 73.41
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
6.28e3
  • 6.28e3
73.37
  • 73.37
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
6.35e3
  • 6.35e3
73.09
  • 73.09
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
6.38e3
  • 6.38e3
72.94
  • 72.94
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
6.44e3
  • 6.44e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.55e3
  • 6.55e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
6.65e3
  • 6.65e3
71.79
  • 71.79
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
6.68e3
  • 6.68e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
6.74e3
  • 6.74e3
71.45
  • 71.45
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
6.82e3
  • 6.82e3
71.11
  • 71.11
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
6.90e3
  • 6.90e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
6.97e3
  • 6.97e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.07e3
  • 7.07e3
  • 7.47e3
  • 8.11e3
  • 8.30e3
70.05
  • 70.05
  • 68.35
  • 65.62
  • 64.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
7.24e3
  • 7.24e3
69.29
  • 69.29
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
7.34e3
  • 7.34e3
  • 8.00e3
68.88
  • 68.88
  • 66.09
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
7.49e3
  • 7.49e3
  • 8.63e3
  • 9.39e3
68.24
  • 68.24
  • 63.43
  • 60.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
7.55e3
  • 7.55e3
68.02
  • 68.02
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.69e3
  • 7.69e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
7.71e3
  • 7.71e3
67.31
  • 67.31
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
7.73e3
  • 7.73e3
67.25
  • 67.25
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
7.73e3
  • 7.73e3
67.23
  • 67.23
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
7.86e3
  • 7.86e3
66.68
  • 66.68
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
8.01e3
  • 8.01e3
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
8.15e3
  • 8.15e3
65.45
  • 65.45
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.33
  • 51.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016070.

Cross-references

EnsemblENSSSCG00000016070 (GTF3C3)
HGNCHGNC:4666 (GTF3C3)
EMBLCU466965
Uniprot/SPTREMBLF1SN14, F1SN14_PIG, I3LAX1, I3LAX1_PIG

Do not show this banner again