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S. scrofa Gene: UNC80 - ENSSSCG00000016153 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016153
NameUNC80
Descriptionunc-80 homolog, NALCN activator [Source:HGNC Symbol;Acc:HGNC:26582]
OrganismSus scrofa (pig)
Synonym(s)c2orf21, flj33496, kiaa1843, unc-80
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
2.19e3
  • 2.19e3
  • 5.32e3
90.70
  • 90.70
  • 77.46
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
2.61e3
  • 2.61e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
4.44e3
  • 4.44e3
81.17
  • 81.17
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.13e3
  • 5.13e3
  • 1.09e4
78.25
  • 78.25
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
5.35e3
  • 5.35e3
77.32
  • 77.32
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
5.46e3
  • 5.46e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
5.73e3
  • 5.73e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
5.76e3
  • 5.76e3
75.58
  • 75.58
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
6.00e3
  • 6.00e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
6.27e3
  • 6.27e3
  • 7.20e3
  • 7.22e3
  • 8.73e3
73.42
  • 73.42
  • 69.47
  • 69.41
  • 63.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
7.36e3
  • 7.36e3
68.80
  • 68.80
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
7.60e3
  • 7.60e3
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
8.54e3
  • 8.54e3
63.80
  • 63.80
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
8.65e3
  • 8.65e3
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.59
  • 40.59
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.61e4
  • 1.61e4
31.59
  • 31.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.64e4
  • 1.64e4
  • 1.75e4
30.63
  • 30.63
  • 25.69
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.85e4
  • 1.85e4
  • 1.92e4
21.42
  • 21.42
  • 18.66
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016153.

Cross-references

EnsemblENSSSCG00000016153 (UNC80)
HGNCHGNC:26582 (UNC80)
EMBLCU856637, FP340606
Uniprot/SPTREMBLF1SSS4, F1SSS4_PIG, I3LDL4, I3LDL4_PIG

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