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S. scrofa Gene: IHH - ENSSSCG00000016204 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016204
NameIHH
Descriptionindian hedgehog [Source:HGNC Symbol;Acc:HGNC:5956]
OrganismSus scrofa (pig)
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
648
  • 648
97.26
  • 97.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
8.45e3
  • 8.45e3
  • 8.55e3
  • 1.23e4
64.18
  • 64.18
  • 63.75
  • 47.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
9.99e3
  • 9.99e3
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
57.22
  • 57.22
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.84
  • 44.84
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
  • 1.56e4
44.06
  • 44.06
  • 33.81
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
  • 1.88e4
44.01
  • 44.01
  • 20.36
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.41e4
  • 1.41e4
40.38
  • 40.38
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.97
  • 39.97
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.72e4
35.57
  • 35.57
  • 27.19
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.67e4
  • 1.67e4
29.23
  • 29.23
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 1.98e4
  • 2.16e4
22.17
  • 22.17
  • 15.93
  • 8.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.93e4
  • 1.93e4
18.13
  • 18.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria11 species11 genesCompare expression
Theria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016204.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000016204.

Cross-references

EnsemblENSSSCG00000016204 (IHH)
EMBLAEMK01182097, CU467077
Uniprot/SPTREMBLF1SRW6, F1SRW6_PIG

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