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S. scrofa Gene: ASB18 - ENSSSCG00000016318 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016318
NameASB18
Descriptionankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
OrganismSus scrofa (pig)
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.80e3
  • 5.80e3
  • 7.72e3
  • 9.35e3
75.41
  • 75.41
  • 67.28
  • 60.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
6.83e3
  • 6.83e3
71.07
  • 71.07
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
8.60e3
  • 8.60e3
  • 8.76e3
  • 9.23e3
  • 1.08e4
  • 1.14e4
63.53
  • 63.53
  • 62.85
  • 60.87
  • 54.02
  • 51.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
9.30e3
  • 9.30e3
60.60
  • 60.60
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
9.76e3
  • 9.76e3
58.64
  • 58.64
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.49
  • 55.49
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.06e4
  • 1.06e4
  • 1.10e4
  • 1.25e4
  • 1.50e4
54.88
  • 54.88
  • 53.18
  • 47.17
  • 36.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.68
  • 48.68
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
46.25
  • 46.25
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
46.19
  • 46.19
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.43e4
  • 1.43e4
39.50
  • 39.50
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
38.47
  • 38.47
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
38.03
  • 38.03
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
35.53
  • 35.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
24.23
  • 24.23
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.81e4
  • 1.81e4
23.15
  • 23.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species3 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016318.

Cross-references

EnsemblENSSSCG00000016318 (ASB18)
HGNCHGNC:19770 (ASB18)
EMBLCU571283, CU694589
Uniprot/SPTREMBLF1SM12, F1SM12_PIG

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