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S. scrofa Gene: SEPT2 - ENSSSCG00000016370 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016370
NameSEPT2
Descriptionseptin 2 [Source:HGNC Symbol;Acc:HGNC:7729]
OrganismSus scrofa (pig)
Orthologs(s)24 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
465
  • 465
  • 522
  • 1.69e3
98.03
  • 98.03
  • 97.79
  • 92.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
567
  • 567
97.60
  • 97.60
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
585
  • 585
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
639
  • 639
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
690
  • 690
  • 716
97.08
  • 97.08
  • 96.97
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
727
  • 727
  • 953
  • 1.97e3
96.92
  • 96.92
  • 95.96
  • 91.67
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
743
  • 743
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
827
  • 827
96.50
  • 96.50
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
885
  • 885
  • 1.15e3
  • 1.34e3
  • 1.47e3
96.25
  • 96.25
  • 95.15
  • 94.31
  • 93.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
924
  • 924
  • 1.25e3
  • 2.09e3
96.09
  • 96.09
  • 94.70
  • 91.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
930
  • 930
  • 1.71e3
  • 1.24e4
96.06
  • 96.06
  • 92.76
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
951
  • 951
  • 2.98e3
95.97
  • 95.97
  • 87.35
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
992
  • 992
  • 3.08e3
95.80
  • 95.80
  • 86.94
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.11e3
  • 1.11e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.15e3
  • 1.15e3
95.12
  • 95.12
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.18e3
  • 1.18e3
  • 1.50e3
95.02
  • 95.02
  • 93.65
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.28e3
  • 1.28e3
  • 2.24e3
  • 2.73e3
  • 2.86e3
  • 3.38e3
94.56
  • 94.56
  • 90.52
  • 88.42
  • 87.87
  • 85.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.31e3
  • 1.31e3
94.47
  • 94.47
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.32e3
  • 1.32e3
94.43
  • 94.43
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.34e3
  • 1.34e3
  • 2.80e3
94.31
  • 94.31
  • 88.15
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.35e3
  • 1.35e3
94.30
  • 94.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.37e3
  • 1.37e3
  • 1.52e3
  • 1.52e3
94.21
  • 94.21
  • 93.58
  • 93.55
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.59e3
  • 1.59e3
  • 1.75e3
  • 2.18e3
93.28
  • 93.28
  • 92.60
  • 90.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.61e3
  • 1.61e3
93.19
  • 93.19
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.65e3
  • 1.65e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.66e3
  • 1.66e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.66e3
  • 1.66e3
  • 3.22e3
92.96
  • 92.96
  • 86.37
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.74e3
  • 1.74e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.74e3
  • 1.74e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.86e3
  • 1.86e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.88e3
  • 1.88e3
92.02
  • 92.02
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.89e3
  • 1.89e3
91.99
  • 91.99
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.93e3
  • 1.93e3
91.84
  • 91.84
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
2.08e3
  • 2.08e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
2.12e3
  • 2.12e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
2.13e3
  • 2.13e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
2.14e3
  • 2.14e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
2.17e3
  • 2.17e3
90.82
  • 90.82
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
2.27e3
  • 2.27e3
90.38
  • 90.38
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.34e3
  • 2.34e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
2.72e3
  • 2.72e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
2.73e3
  • 2.73e3
88.41
  • 88.41
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
2.86e3
  • 2.86e3
87.87
  • 87.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
3.32e3
  • 3.32e3
85.92
  • 85.92
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
3.51e3
  • 3.51e3
85.14
  • 85.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016370.

Paralogs (same species)

Paralogy information comes from OMA : ENSSSCG00000016370.

Cross-references

EnsemblENSSSCG00000016370 (SEPT2)
EMBLFP017230
Uniprot/SPTREMBLF1SIP0, F1SIP0_PIG

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