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S. scrofa Gene: AOC1 - ENSSSCG00000016442 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016442
NameAOC1
Descriptionamine oxidase, copper containing 1 [Source:HGNC Symbol;Acc:HGNC:80]
OrganismSus scrofa (pig)
Synonym(s)abp1, dao, f1ssl3, q29317
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
53.0
  • 53.0
  • 217
99.78
  • 99.78
  • 99.08
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
486
  • 486
97.94
  • 97.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
935
  • 935
  • 6.05e3
  • 6.19e3
96.04
  • 96.04
  • 74.35
  • 73.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.44e3
  • 1.44e3
93.89
  • 93.89
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.50e3
  • 1.50e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.62e3
  • 1.62e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
8.91e3
  • 8.91e3
62.22
  • 62.22
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.17e4
  • 1.17e4
50.48
  • 50.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.58e4
48.09
  • 48.09
  • 33.14
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.73e4
40.03
  • 40.03
  • 26.55
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
  • 1.47e4
  • 1.58e4
38.99
  • 38.99
  • 37.69
  • 33.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.47e4
  • 1.47e4
  • 1.94e4
  • 2.01e4
37.62
  • 37.62
  • 17.80
  • 14.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.59e4
  • 1.59e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.59e4
  • 1.59e4
32.49
  • 32.49
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
30.02
  • 30.02
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.34
  • 29.34
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.72e4
  • 1.72e4
27.04
  • 27.04
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
26.85
  • 26.85
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.74e4
  • 1.74e4
26.44
  • 26.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
23.74
  • 23.74
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.86e4
  • 1.86e4
  • 2.06e4
  • 2.08e4
  • 2.19e4
21.08
  • 21.08
  • 12.89
  • 11.63
  • 7.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.90e4
  • 1.90e4
19.63
  • 19.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.99e4
  • 1.99e4
15.81
  • 15.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016442.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000016442.

Cross-references

EnsemblENSSSCG00000016442 (AOC1)
HGNCHGNC:80 (AOC1)
EMBLCU928555, F14708
Uniprot/SWISSPROTAOC1_PIG, Q9TRC7

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