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S. scrofa Gene: GIMAP8 - ENSSSCG00000016452 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016452
NameGIMAP8
DescriptionGTPase, IMAP family member 8 [Source:HGNC Symbol;Acc:HGNC:21792]
OrganismSus scrofa (pig)
Synonym(s)dkfzp667i133, hian6, ian9
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.60e3
  • 1.60e3
  • 1.61e3
  • 1.75e3
93.21
  • 93.21
  • 93.20
  • 92.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
2.60e3
  • 2.60e3
89.00
  • 89.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.87e3
  • 3.87e3
  • 4.42e3
  • 5.50e3
83.59
  • 83.59
  • 81.26
  • 76.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.29e3
  • 4.29e3
81.82
  • 81.82
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
6.51e3
  • 6.51e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
7.42e3
  • 7.42e3
68.56
  • 68.56
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
7.72e3
  • 7.72e3
67.29
  • 67.29
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.73e3
  • 7.73e3
67.26
  • 67.26
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
8.09e3
  • 8.09e3
65.70
  • 65.70
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
8.18e3
  • 8.18e3
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.46e3
  • 9.46e3
  • 1.06e4
  • 1.15e4
59.89
  • 59.89
  • 55.28
  • 51.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
9.62e3
  • 9.62e3
  • 1.13e4
59.24
  • 59.24
  • 52.29
AEIR
  • AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
9.99e3
  • 9.99e3
57.66
  • 57.66
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
56.27
  • 56.27
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
56.13
  • 56.13
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.06e4
  • 1.06e4
55.04
  • 55.04
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.19e4
  • 1.19e4
  • 1.39e4
  • 1.47e4
49.73
  • 49.73
  • 41.06
  • 37.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.45e4
  • 1.45e4
  • 1.52e4
48.40
  • 48.40
  • 38.65
  • 38.53
  • 35.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.44e4
47.51
  • 47.51
  • 38.76
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.34e4
  • 1.40e4
47.40
  • 47.40
  • 43.13
  • 40.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
46.47
  • 46.47
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
46.03
  • 46.03
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.29e4
  • 1.29e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
  • 1.39e4
43.87
  • 43.87
  • 40.96
AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.51
  • 43.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
43.16
  • 43.16
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
42.64
  • 42.64
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.43e4
  • 1.44e4
  • 1.57e4
  • 1.58e4
42.41
  • 42.41
  • 39.52
  • 38.96
  • 33.34
  • 33.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
42.09
  • 42.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
41.92
  • 41.92
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
40.26
  • 40.26
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
39.90
  • 39.90
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.75
  • 39.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
38.81
  • 38.81
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.45e4
  • 1.45e4
38.54
  • 38.54
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.52e4
  • 1.52e4
35.44
  • 35.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
34.68
  • 34.68
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.59e4
  • 1.59e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.70e4
  • 1.70e4
27.94
  • 27.94
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.80e4
  • 1.80e4
23.91
  • 23.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016452.

Cross-references

EnsemblENSSSCG00000016452 (GIMAP8)
HGNCHGNC:21792 (GIMAP8)
EMBLFP236671
Uniprot/SPTREMBLF1SSJ1, F1SSJ1_PIG

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