We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: - ENSSSCG00000016461 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016461
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
433
  • 433
  • 598
  • 2.93e3
98.17
  • 98.17
  • 97.47
  • 87.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
486
  • 486
  • 970
  • 5.24e3
97.94
  • 97.94
  • 95.89
  • 77.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
557
  • 557
  • 1.16e3
97.64
  • 97.64
  • 95.11
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
617
  • 617
  • 697
  • 4.11e3
97.39
  • 97.39
  • 97.05
  • 82.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
667
  • 667
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
735
  • 735
  • 2.47e3
  • 2.83e3
  • 5.80e3
  • 6.28e3
96.89
  • 96.89
  • 89.52
  • 87.99
  • 75.40
  • 73.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
742
  • 742
  • 4.83e3
  • 1.24e4
96.86
  • 96.86
  • 79.52
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
878
  • 878
96.28
  • 96.28
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.04e3
  • 1.04e3
  • 2.71e3
95.58
  • 95.58
  • 88.54
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.40e3
  • 1.40e3
94.07
  • 94.07
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
  • 1.62e3
  • 1.73e3
93.27
  • 93.27
  • 93.16
  • 92.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.62e3
  • 1.62e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.64e3
  • 1.64e3
93.05
  • 93.05
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.80e3
  • 1.80e3
92.36
  • 92.36
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.85e3
  • 1.85e3
92.16
  • 92.16
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.95e3
  • 1.95e3
91.72
  • 91.72
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
90.88
  • 90.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.29e3
  • 2.29e3
  • 3.75e3
  • 7.74e3
90.28
  • 90.28
  • 84.13
  • 67.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
2.81e3
  • 2.81e3
  • 7.20e3
88.08
  • 88.08
  • 69.47
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.90e3
  • 2.90e3
  • 1.25e4
87.71
  • 87.71
  • 46.97
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.04e3
  • 3.04e3
  • 3.64e3
  • 4.10e3
  • 5.44e3
87.13
  • 87.13
  • 84.59
  • 82.61
  • 76.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
3.38e3
  • 3.38e3
85.68
  • 85.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
3.74e3
  • 3.74e3
84.16
  • 84.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
82.12
  • 82.12
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.53e3
  • 4.53e3
80.79
  • 80.79
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
4.70e3
  • 4.70e3
  • 1.03e4
80.10
  • 80.10
  • 56.30
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
5.29e3
  • 5.29e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
5.59e3
  • 5.59e3
76.32
  • 76.32
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
5.75e3
  • 5.75e3
75.65
  • 75.65
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
5.79e3
  • 5.79e3
75.48
  • 75.48
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
6.48e3
  • 6.48e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
6.68e3
  • 6.68e3
71.69
  • 71.69
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
6.78e3
  • 6.78e3
71.27
  • 71.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
7.11e3
  • 7.11e3
69.88
  • 69.88
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
7.13e3
  • 7.13e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.14e3
  • 7.14e3
69.72
  • 69.72
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
7.16e3
  • 7.16e3
69.67
  • 69.67
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
7.24e3
  • 7.24e3
69.32
  • 69.32
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
7.42e3
  • 7.42e3
68.56
  • 68.56
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.42e3
  • 7.42e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.59e3
  • 7.59e3
67.83
  • 67.83
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
7.79e3
  • 7.79e3
66.96
  • 66.96
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
8.43e3
  • 8.43e3
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
8.78e3
  • 8.78e3
62.81
  • 62.81
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.00e4
  • 1.00e4
57.59
  • 57.59
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.93
  • 50.93
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
44.29
  • 44.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016461.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000016461.

Cross-references

Do not show this banner again