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S. scrofa Gene: - ENSSSCG00000016695 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000016695
Name-
Description-
OrganismSus scrofa (pig)
Synonym(s)hibadh
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
310
  • 310
98.69
  • 98.69
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
360
  • 360
  • 1.44e3
98.48
  • 98.48
  • 93.90
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
460
  • 460
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
461
  • 461
  • 566
  • 893
98.05
  • 98.05
  • 97.60
  • 96.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
621
  • 621
  • 903
  • 1.07e3
97.37
  • 97.37
  • 96.18
  • 95.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
660
  • 660
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
832
  • 832
96.48
  • 96.48
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
879
  • 879
  • 900
  • 1.31e3
  • 1.87e3
  • 3.44e3
96.28
  • 96.28
  • 96.19
  • 94.47
  • 92.06
  • 85.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
956
  • 956
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
959
  • 959
95.94
  • 95.94
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.03e3
  • 1.03e3
95.65
  • 95.65
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.03e3
  • 1.03e3
95.63
  • 95.63
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.04e3
  • 1.04e3
95.61
  • 95.61
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.05e3
  • 1.05e3
95.54
  • 95.54
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.20e3
  • 1.20e3
  • 2.69e3
94.93
  • 94.93
  • 88.62
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.65e3
  • 1.65e3
  • 3.06e3
93.03
  • 93.03
  • 87.03
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.75e3
  • 1.75e3
  • 2.32e3
  • 1.24e4
92.58
  • 92.58
  • 90.17
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
2.12e3
  • 2.12e3
  • 4.57e3
  • 4.67e3
91.00
  • 91.00
  • 80.65
  • 80.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.39e3
  • 2.39e3
89.87
  • 89.87
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
2.40e3
  • 2.40e3
89.84
  • 89.84
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
2.52e3
  • 2.52e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.85e3
  • 2.85e3
  • 4.63e3
87.91
  • 87.91
  • 80.38
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.91e3
  • 2.91e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
2.95e3
  • 2.95e3
  • 3.33e3
  • 4.27e3
87.50
  • 87.50
  • 85.87
  • 81.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
2.99e3
  • 2.99e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.03e3
  • 3.03e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
3.09e3
  • 3.09e3
  • 3.72e3
  • 4.69e3
  • 4.99e3
86.92
  • 86.92
  • 84.23
  • 80.13
  • 78.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.12e3
  • 3.12e3
  • 5.23e3
86.79
  • 86.79
  • 77.81
AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
3.12e3
  • 3.12e3
86.76
  • 86.76
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.14e3
  • 3.14e3
  • 4.04e3
86.69
  • 86.69
  • 82.90
AEIR
  • AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
3.31e3
  • 3.31e3
85.98
  • 85.98
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
3.33e3
  • 3.33e3
85.91
  • 85.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
3.41e3
  • 3.41e3
  • 4.97e3
  • 7.24e3
85.55
  • 85.55
  • 78.92
  • 69.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.44e3
  • 3.44e3
85.44
  • 85.44
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
3.45e3
  • 3.45e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
3.50e3
  • 3.50e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
83.76
  • 83.76
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
3.87e3
  • 3.87e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
3.95e3
  • 3.95e3
83.27
  • 83.27
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
4.38e3
  • 4.38e3
81.44
  • 81.44
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
4.62e3
  • 4.62e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
4.64e3
  • 4.64e3
80.32
  • 80.32
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
5.14e3
  • 5.14e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
5.33e3
  • 5.33e3
77.42
  • 77.42
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
5.52e3
  • 5.52e3
76.58
  • 76.58
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
6.43e3
  • 6.43e3
72.75
  • 72.75
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
7.56e3
  • 7.56e3
67.97
  • 67.97
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.90e3
  • 7.90e3
66.52
  • 66.52
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
8.05e3
  • 8.05e3
65.90
  • 65.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000016695.

Cross-references

EnsemblENSSSCG00000016695
EMBLFP103066
Uniprot/SPTREMBLF1SHU0, F1SHU0_PIG

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