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S. scrofa Gene: HID1 - ENSSSCG00000017219 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000017219
NameHID1
DescriptionHID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
OrganismSus scrofa (pig)
Synonym(s)c17orf28, dmc1, hid-1
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.18e3
  • 1.18e3
  • 5.24e3
  • 5.69e3
95.02
  • 95.02
  • 77.79
  • 75.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.03e3
  • 2.03e3
  • 5.00e3
91.40
  • 91.40
  • 78.80
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
2.41e3
  • 2.41e3
89.79
  • 89.79
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
2.88e3
  • 2.88e3
87.79
  • 87.79
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.09e3
  • 3.09e3
  • 3.69e3
  • 4.02e3
  • 5.34e3
86.92
  • 86.92
  • 84.37
  • 82.98
  • 77.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.31e3
  • 3.31e3
  • 8.53e3
85.98
  • 85.98
  • 63.83
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
3.36e3
  • 3.36e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.51e3
  • 3.51e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
4.60e3
  • 4.60e3
80.51
  • 80.51
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
5.22e3
  • 5.22e3
  • 1.24e4
77.88
  • 77.88
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
6.12e3
  • 6.12e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
6.43e3
  • 6.43e3
  • 7.35e3
  • 1.34e4
72.76
  • 72.76
  • 68.85
  • 43.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
6.48e3
  • 6.48e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
6.60e3
  • 6.60e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
6.99e3
  • 6.99e3
  • 1.18e4
70.39
  • 70.39
  • 49.82
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
7.50e3
  • 7.50e3
  • 8.44e3
68.20
  • 68.20
  • 64.24
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
7.53e3
  • 7.53e3
  • 1.30e4
68.10
  • 68.10
  • 44.90
AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
7.68e3
  • 7.68e3
67.45
  • 67.45
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
7.74e3
  • 7.74e3
67.20
  • 67.20
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
7.93e3
  • 7.93e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.96e3
  • 7.96e3
66.26
  • 66.26
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
8.01e3
  • 8.01e3
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
8.08e3
  • 8.08e3
65.75
  • 65.75
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
8.19e3
  • 8.19e3
65.28
  • 65.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
8.26e3
  • 8.26e3
  • 8.76e3
  • 1.16e4
64.98
  • 64.98
  • 62.87
  • 50.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
  • 9.20e3
  • 9.23e3
64.85
  • 64.85
  • 61.01
  • 60.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
8.44e3
  • 8.44e3
64.23
  • 64.23
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.65e3
  • 8.65e3
63.32
  • 63.32
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
8.73e3
  • 8.73e3
62.98
  • 62.98
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.95e3
  • 8.95e3
  • 9.42e3
62.09
  • 62.09
  • 60.07
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
9.15e3
  • 9.15e3
  • 9.55e3
  • 1.12e4
  • 1.22e4
  • 1.36e4
61.20
  • 61.20
  • 59.51
  • 52.64
  • 48.33
  • 42.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.07e4
  • 1.07e4
54.85
  • 54.85
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.11e4
  • 1.11e4
53.13
  • 53.13
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.13e4
  • 1.13e4
51.93
  • 51.93
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
49.07
  • 49.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
48.84
  • 48.84
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.57
  • 48.57
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.37
  • 47.37
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
47.00
  • 47.00
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
45.05
  • 45.05
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
44.03
  • 44.03
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.69
  • 43.69
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
43.49
  • 43.49
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
36.08
  • 36.08
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.57e4
  • 1.57e4
33.40
  • 33.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000017219.

Cross-references

EnsemblENSSSCG00000017219 (HID1)
HGNCHGNC:15736 (HID1)
EMBLCU640421
Uniprot/SPTREMBLF1RVV6, F1RVV6_PIG

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