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S. scrofa Gene: CH242-307O4.3 - ENSSSCG00000017235 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000017235
NameCH242-307O4.3
Description-
OrganismSus scrofa (pig)
Orthologs(s)4 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
8.83e3
  • 8.83e3
  • 1.08e4
  • 1.41e4
62.59
  • 62.59
  • 54.32
  • 40.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.03e4
  • 1.03e4
56.25
  • 56.25
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
  • 1.74e4
55.40
  • 55.40
  • 26.38
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.56e4
  • 1.63e4
53.39
  • 53.39
  • 33.79
  • 30.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.10e4
  • 1.10e4
53.28
  • 53.28
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.60e4
47.51
  • 47.51
  • 32.14
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
46.12
  • 46.12
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.23
  • 42.23
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.39e4
  • 1.39e4
40.88
  • 40.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
  • 1.44e4
39.76
  • 39.76
  • 38.92
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.45e4
  • 1.45e4
  • 1.83e4
38.66
  • 38.66
  • 22.55
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
36.73
  • 36.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.57e4
  • 1.57e4
  • 1.59e4
  • 1.64e4
33.26
  • 33.26
  • 32.62
  • 30.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
  • 1.68e4
32.38
  • 32.38
  • 28.86
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.65e4
  • 1.65e4
30.08
  • 30.08
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.66e4
  • 1.66e4
29.62
  • 29.62
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.66e4
  • 1.66e4
  • 1.69e4
  • 1.82e4
29.61
  • 29.61
  • 28.28
  • 22.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
28.55
  • 28.55
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
25.03
  • 25.03
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
24.41
  • 24.41
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.92e4
  • 1.92e4
  • 1.94e4
  • 1.95e4
18.68
  • 18.68
  • 17.98
  • 17.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.94e4
  • 1.94e4
17.60
  • 17.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSSSCG00000017235 (CH242-307O4.3)

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