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S. scrofa Gene: NGFR - ENSSSCG00000017548 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000017548
NameNGFR
Descriptionnerve growth factor receptor [Source:HGNC Symbol;Acc:HGNC:7809]
OrganismSus scrofa (pig)
Synonym(s)cd271, p75ntr, tnfrsf16
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
2.99e3
  • 2.99e3
  • 6.01e3
87.33
  • 87.33
  • 74.53
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
3.31e3
  • 3.31e3
  • 8.74e3
  • 9.55e3
85.98
  • 85.98
  • 62.96
  • 59.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.45e3
  • 4.45e3
  • 1.04e4
81.15
  • 81.15
  • 56.11
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.50e3
  • 5.50e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.82e3
  • 5.82e3
75.35
  • 75.35
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
6.02e3
  • 6.02e3
  • 1.51e4
  • 1.53e4
  • 1.60e4
74.47
  • 74.47
  • 36.00
  • 35.14
  • 32.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
8.37e3
  • 8.37e3
  • 1.35e4
64.50
  • 64.50
  • 42.89
AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
8.80e3
  • 8.80e3
62.71
  • 62.71
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.15e4
  • 1.15e4
  • 1.24e4
51.05
  • 51.05
  • 47.51
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
46.30
  • 46.30
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
45.99
  • 45.99
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
44.54
  • 44.54
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.40e4
  • 1.40e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
40.39
  • 40.39
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
38.02
  • 38.02
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
  • 1.58e4
  • 1.70e4
  • 1.73e4
35.73
  • 35.73
  • 33.04
  • 27.90
  • 26.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.54e4
  • 1.54e4
34.71
  • 34.71
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.67e4
33.34
  • 33.34
  • 29.12
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.57e4
  • 1.57e4
  • 1.59e4
  • 1.60e4
33.32
  • 33.32
  • 32.68
  • 32.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
31.27
  • 31.27
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.73e4
  • 1.73e4
26.75
  • 26.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.75e4
  • 1.75e4
26.02
  • 26.02
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
25.97
  • 25.97
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
25.13
  • 25.13
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.95e4
  • 1.95e4
17.42
  • 17.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000017548.

Cross-references

EnsemblENSSSCG00000017548 (NGFR)
HGNCHGNC:7809 (NGFR)
EMBLFP015993
Uniprot/SPTREMBLF1RVT6, F1RVT6_PIG

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