We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: SEPT4 - ENSSSCG00000017643 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000017643
NameSEPT4
Descriptionseptin 4 [Source:HGNC Symbol;Acc:HGNC:9165]
OrganismSus scrofa (pig)
Synonym(s)arts, c12h17orf47, ce5b3, h5, hcdcrel-2, hucep-7, mart, pnutl2
Orthologs(s)23 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
115
  • 115
  • 332
99.52
  • 99.52
  • 98.60
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
143
  • 143
99.40
  • 99.40
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
245
  • 245
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
261
  • 261
  • 1.19e3
98.90
  • 98.90
  • 94.97
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
323
  • 323
  • 438
  • 460
  • 463
98.64
  • 98.64
  • 98.15
  • 98.06
  • 98.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
374
  • 374
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
387
  • 387
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
431
  • 431
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
447
  • 447
98.11
  • 98.11
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
609
  • 609
97.42
  • 97.42
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
929
  • 929
96.07
  • 96.07
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.12e3
  • 1.12e3
95.25
  • 95.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
1.34e3
  • 1.34e3
  • 1.97e3
  • 1.98e3
94.31
  • 94.31
  • 91.64
  • 91.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.73e3
  • 1.73e3
  • 2.28e3
  • 2.47e3
92.66
  • 92.66
  • 90.33
  • 89.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.77e3
  • 1.77e3
  • 2.72e3
92.49
  • 92.49
  • 88.50
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.93e3
  • 1.93e3
  • 4.21e3
  • 4.46e3
  • 5.56e3
  • 6.01e3
91.83
  • 91.83
  • 82.14
  • 81.09
  • 76.43
  • 74.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.94e3
  • 1.94e3
  • 8.21e3
91.79
  • 91.79
  • 65.22
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
2.40e3
  • 2.40e3
89.85
  • 89.85
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.31e3
  • 3.31e3
  • 4.15e3
  • 1.24e4
85.97
  • 85.97
  • 82.41
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
3.75e3
  • 3.75e3
84.11
  • 84.11
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
4.02e3
  • 4.02e3
  • 5.50e3
82.95
  • 82.95
  • 76.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.39e3
  • 4.39e3
  • 5.72e3
  • 6.01e3
81.40
  • 81.40
  • 75.74
  • 74.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
4.43e3
  • 4.43e3
  • 5.90e3
81.22
  • 81.22
  • 75.01
AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
4.76e3
  • 4.76e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.78e3
  • 4.78e3
79.74
  • 79.74
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
4.79e3
  • 4.79e3
  • 5.25e3
79.69
  • 79.69
  • 77.75
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.30e3
  • 5.30e3
  • 6.21e3
  • 7.26e3
77.53
  • 77.53
  • 73.66
  • 69.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
5.53e3
  • 5.53e3
76.58
  • 76.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
72.52
  • 72.52
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
6.54e3
  • 6.54e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
6.84e3
  • 6.84e3
71.01
  • 71.01
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.93e3
  • 6.93e3
70.62
  • 70.62
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.40e3
  • 7.40e3
68.65
  • 68.65
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
8.22e3
  • 8.22e3
65.16
  • 65.16
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
8.53e3
  • 8.53e3
63.83
  • 63.83
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
8.54e3
  • 8.54e3
63.82
  • 63.82
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
8.57e3
  • 8.57e3
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
8.60e3
  • 8.60e3
63.54
  • 63.54
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
8.79e3
  • 8.79e3
62.76
  • 62.76
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.23e3
  • 9.23e3
60.87
  • 60.87
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
9.81e3
  • 9.81e3
58.43
  • 58.43
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
9.89e3
  • 9.89e3
58.10
  • 58.10
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
57.39
  • 57.39
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
55.92
  • 55.92
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.83
  • 54.83
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.74
  • 45.74
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
43.08
  • 43.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000017643.

Paralogs (same species)

Paralogy information comes from OMA : ENSSSCG00000017643.

Cross-references

EnsemblENSSSCG00000017643 (SEPT4)
HGNCHGNC:9165 (SEPT4)
EMBLCU681830
Uniprot/SPTREMBLF1RRN6, F1RRN6_PIG, K7GM78, K7GM78_PIG

Do not show this banner again