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S. scrofa Gene: MYH1 - ENSSSCG00000018005 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000018005
NameMYH1
Descriptionmyosin-1 [Source:RefSeq peptide;Acc:NP_001098421]
OrganismSus scrofa (pig)
Orthologs(s)31 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
12.6
  • 12.6
  • 15.8
  • 20.7
  • 42.6
  • 217
99.95
  • 99.95
  • 99.94
  • 99.92
  • 99.82
  • 99.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
21.0
  • 21.0
99.92
  • 99.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
26.0
  • 26.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
26.0
  • 26.0
99.89
  • 99.89
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
36.6
  • 36.6
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.05e3
  • 2.05e3
  • 1.48e4
  • 1.89e4
  • 1.98e4
91.33
  • 91.33
  • 37.13
  • 19.99
  • 16.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
4.11e3
  • 4.11e3
  • 1.07e4
  • 1.24e4
82.58
  • 82.58
  • 54.79
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
  • 1.14e4
  • 1.63e4
78.90
  • 78.90
  • 51.79
  • 30.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
6.46e3
  • 6.46e3
  • 1.48e4
  • 1.54e4
72.63
  • 72.63
  • 37.18
  • 34.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
8.28e3
  • 8.28e3
64.89
  • 64.89
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
8.99e3
  • 8.99e3
61.90
  • 61.90
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
9.80e3
  • 9.80e3
  • 1.79e4
58.45
  • 58.45
  • 24.32
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.82e3
  • 9.82e3
58.38
  • 58.38
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
9.92e3
  • 9.92e3
  • 1.18e4
57.97
  • 57.97
  • 49.86
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
9.94e3
  • 9.94e3
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
  • 1.29e4
55.41
  • 55.41
  • 45.53
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.10e4
  • 1.83e4
54.84
  • 54.84
  • 53.47
  • 22.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
47.33
  • 47.33
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
46.24
  • 46.24
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.68
  • 40.68
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
38.82
  • 38.82
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
34.52
  • 34.52
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.55e4
  • 1.55e4
34.19
  • 34.19
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.56e4
  • 1.56e4
33.74
  • 33.74
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.63e4
  • 1.63e4
31.02
  • 31.02
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.69e4
  • 1.69e4
28.53
  • 28.53
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.71e4
  • 1.71e4
27.51
  • 27.51
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
23.29
  • 23.29
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species21 genesCompare expression
Bilateria20 species31 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000018005.

Paralogs (same species)

Cross-references

EnsemblENSSSCG00000018005 (MYH1)
EMBLCU896583
Uniprot/SPTREMBLF1SS62, F1SS62_PIG

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