S. scrofa Gene: U6 - ENSSSCG00000020428 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000020428
NameU6
DescriptionU6 spliceosomal RNA [Source:RFAM;Acc:RF00026]
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
7.94e3
  • 7.94e3
65.87156
  • 65.87156
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
8.09e3
  • 8.09e3
65.18690
  • 65.18690
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
8.87e3
  • 8.87e3
61.84751
  • 61.84751
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
8.91e3
  • 8.91e3
61.66552
  • 61.66552
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
9.40e3
  • 9.40e3
59.57437
  • 59.57437
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
51.68815
  • 51.68815
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.48e4
  • 1.48e4
  • 2.14e4
  • 2.16e4
36.16995
  • 36.16995
  • 7.89999
  • 7.11911
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
35.22432
  • 35.22432
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
35.20557
  • 35.20557
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.54e4
  • 1.54e4
33.73120
  • 33.73120
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.59e4
  • 1.59e4
31.54680
  • 31.54680
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.67e4
  • 1.67e4
28.20475
  • 28.20475
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.73e4
  • 1.73e4
25.58938
  • 25.58938
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
23.59059
  • 23.59059
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.84e4
  • 1.84e4
20.69812
  • 20.69812
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
  • 2.03e4
20.19787
  • 20.19787
  • 12.60754
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.91e4
  • 1.91e4
18.01329
  • 18.01329
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSSSCG00000020428 (U6)

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