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S. scrofa Gene: SDHA - ENSSSCG00000020686 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000020686
NameSDHA
Descriptionsuccinate dehydrogenase complex subunit A, flavoprotein (Fp) [Source:HGNC Symbol;Acc:HGNC:10680]
OrganismSus scrofa (pig)
Synonym(s)fp, sdh2, sdhf
Orthologs(s)28 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
164
  • 164
  • 280
  • 340
99.31
  • 99.31
  • 98.82
  • 98.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
288
  • 288
98.78
  • 98.78
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
332
  • 332
98.60
  • 98.60
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
375
  • 375
  • 512
  • 678
  • 865
  • 948
98.41
  • 98.41
  • 97.83
  • 97.13
  • 96.34
  • 95.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
408
  • 408
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
424
  • 424
  • 807
98.21
  • 98.21
  • 96.58
AEIR
  • AEIR
  • AEIR
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
462
  • 462
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
471
  • 471
  • 835
98.01
  • 98.01
  • 96.46
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
516
  • 516
  • 576
  • 637
  • 954
97.82
  • 97.82
  • 97.56
  • 97.31
  • 95.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
528
  • 528
  • 2.26e3
97.77
  • 97.77
  • 90.42
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
559
  • 559
  • 1.62e3
97.63
  • 97.63
  • 93.12
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
597
  • 597
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
601
  • 601
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
614
  • 614
  • 2.91e3
97.40
  • 97.40
  • 87.69
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
657
  • 657
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
670
  • 670
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
673
  • 673
  • 1.51e3
  • 1.24e4
97.15
  • 97.15
  • 93.62
  • 47.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
682
  • 682
  • 699
  • 951
97.11
  • 97.11
  • 97.04
  • 95.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
746
  • 746
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
778
  • 778
96.71
  • 96.71
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
931
  • 931
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
951
  • 951
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
1.14e3
  • 1.14e3
  • 1.27e3
  • 5.69e3
95.19
  • 95.19
  • 94.64
  • 75.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.30e3
  • 1.30e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.33e3
  • 1.33e3
94.36
  • 94.36
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.37e3
  • 1.37e3
94.22
  • 94.22
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.43e3
  • 1.43e3
  • 1.89e3
  • 3.70e3
93.96
  • 93.96
  • 91.98
  • 84.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
93.58
  • 93.58
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.57e3
  • 1.57e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.62e3
  • 1.62e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.69e3
  • 1.69e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.70e3
  • 1.70e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.70e3
  • 1.70e3
  • 1.92e3
  • 3.87e3
92.78
  • 92.78
  • 91.88
  • 83.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.76e3
  • 1.76e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.76e3
  • 1.76e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.86e3
  • 1.86e3
92.10
  • 92.10
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.92e3
  • 1.92e3
91.88
  • 91.88
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
2.01e3
  • 2.01e3
91.47
  • 91.47
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
2.35e3
  • 2.35e3
90.04
  • 90.04
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
2.39e3
  • 2.39e3
89.88
  • 89.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.48e3
  • 2.48e3
  • 3.06e3
89.49
  • 89.49
  • 87.03
AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
2.49e3
  • 2.49e3
89.45
  • 89.45
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
2.51e3
  • 2.51e3
89.35
  • 89.35
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
3.17e3
  • 3.17e3
86.59
  • 86.59
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
3.77e3
  • 3.77e3
84.04
  • 84.04
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
3.90e3
  • 3.90e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
4.23e3
  • 4.23e3
82.06
  • 82.06
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
4.29e3
  • 4.29e3
81.81
  • 81.81
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
4.59e3
  • 4.59e3
80.55
  • 80.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species14 genesCompare expression
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria26 species28 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000020686.

Cross-references

EnsemblENSSSCG00000020686 (SDHA)
HGNCHGNC:10680 (SDHA)
Uniprot/SPTREMBLI3LS54, I3LS54_PIG

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